Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02092 ATGAACGCCGGTACCGCAACTTTCCGCTCCATTCTCGACAAACCCCTCAGACAGCTTACTGAGGATGACATTTCACAGGTCACCCGCGAAGACTGTCGCAAATTTCTCAAGGAAAAAGGGATGCGTCGGCCTTCGTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCGCTTAAGGCTTTGCTTGAACCCACTGACGACGATTCCGACGCCGGGACTTTCAGAAAGATAACCTTTGTTTCCAAGCCCGAAGATGCCCCACCAGAGAATTTGAATGCGGCTGATTCCGCTACAGTGCCCGGAGCTGATGTTGCAGTTTCAGGTCCAGCTGAAGAGCCGGCTTTGCAGACTGGAGAGGAGTTTCCAAAATCTGGGTCAGCTGGGGAAAAAGCTACCGGTGCTGAAACCGATGAGAAGGCCGTCAGTCCCAGAGGTTGTGAAACTATCTGGTCAGCTGCACAAATGACAATTTTCTACTGTGGTAAGGTGAATGTTTATGATGGAGTACCGCCTGAAAAGGCACGAGCAATCATGCAGATCGCAGCAAGTCCCACCCATTCACCTCCTGATGAATTATTCAATCGAAGTTCAACAGTTTGGCCTTCTTCTTGTCACTTACAGATGGATAAAGATGCTCTTGTCCCATTTGATATGACAATTCCTCAGGTTGCTAAAGCAGATAAGATGGTGGAGTATCCACTGCAGTACAGGGAGAAAGGGAGCACTGCTCGAGATGCTGATGTAGAAGGTCAAGCAAGCAGAAAAGTTTCGCTGCAGCGATATCTTGAAAAGCGGAAAGACAGGGGAAGGCTaaagatcaagaaaaatatagtaGGAACTTCACCTAACTTGGAGATGTACTTGACTGACCAAATGAAGGCTCACACCCCAAATGGTAATTCAAGCCGTAGCAGCACTAGCTCTCCGCCACAGCCTAGACTGACACAAGTTTCTGGTGGCTCATCTGATAACCAGCTAAAGATTGCCCTTCCTTTAGATCTCAACAACAAAGATGATCAAGAATGCTA 1028 0.4728 MNAGTATFRSILDKPLRQLTEDDISQVTREDCRKFLKEKGMRRPSWNKSQAIQQVISLKALLEPTDDDSDAGTFRKITFVSKPEDAPPENLNAADSATVPGADVAVSGPAEEPALQTGEEFPKSGSAGEKATGAETDEKAVSPRGCETIWSAAQMTIFYCGKVNVYDGVPPEKARAIMQIAASPTHSPPDELFNRSSTVWPSSCHLQMDKDALVPFDMTIPQVAKADKMVEYPLQYREKGSTARDADVEGQASRKVSLQRYLEKRKDRGRLKIKKNIVGTSPNLEMYLTDQMKAHTPNGNSSRSSTSSPPQPRLTQVSGGSSDNQLKIALPLDLNNKDDQEC 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02092 342 MobiDBLite consensus disorder prediction 81 142 - -
Bva05g02092 342 MobiDBLite consensus disorder prediction 293 342 - -
Bva05g02092 342 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 4 329 IPR040390 -
Bva05g02092 342 Pfam tify domain 152 182 IPR010399 -
Bva05g02092 342 Pfam Jas motif 251 268 IPR018467 -
Bva05g02092 342 ProSiteProfiles Tify domain profile. 148 183 IPR010399 -
Bva05g02092 342 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 4 329 - -
Bva05g02092 342 MobiDBLite consensus disorder prediction 293 329 - -
Bva05g02092 342 SMART tify_2 148 183 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02092 Bva-Chr5 15850740 15856306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02092 1 291 Tify Gene Family AT4G14720 49.669 2.58e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva05g02092 tify 2.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02092 - - gmx:100808970 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02092 05 15850740 15856306 Bva05g02092 05 15850740 15856306 ECH