Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02085 ATGGCGGAAACTGAGAGAGGGTCGGTTGCCACAGAGGGCGGTGCCGGTGAACGGATATCTCTGAAAGATCAGGgtaatgaatttttcaaagcaGGCAAGTATCTCAAAGCAGCTGCGCTTTATACACAAGCCATCAAGCAAGACCCTTCAAACCCCACTCTTTACAGCAATCGTGCTGCAGCATTGCTGCAATTGGATAAGCTTAATAAAGCATTTGATGATGCTGACatgacaattaaattaaaacccCAATGGGAAAAGGGTCACTTCCGGAAAGGATGCATATTGGAGGCAATGAAACGATACGATGATGCCTTGGCTGCCTTTCAGGTGGCTTTGCAGTACAACCCACAAAGTCAAGAAGtatcaaaaaagataaagaagatAAACCAACTGGTTAGAGATAGAAAGCGAGTTGAAGAAGTGGAGAGCATGAGATCTAATATTGACATGGCAAAGCATTTAGATAAGCTGAAGCCTGAACTGTCTGGGCAGTATGGATCTAAAGAATGCGAGAAAGAGATATTCTCTTTCCTTGTTGAAACCATGGAGACAGCTGTAAAATCTTGGCATGAAACTTCAACAGTAGATGCTAGAGTCTACTTTCTTCTTGATAAGGAAAAGACCCAGACTGATAAGTATGCTCCAGTTGTAAATATTGATAAGGCTTTTGAATCGCCCCACACACATGGCAACTGCTTTTCATTTCTTAGGCAGTATGCTGAGGAGTCTTTCTCCAGAGCAGCCTGCTTAGTAGCTCCAAAAAGCATAATTGCTTATCCGCAGGTCTGGAAAGGCCAAGGATCAAGGAAGTGGAAGCAGGGGCAGAATGATGGTTTCTTTGTTCAATTTGAGTCTCCTTCTGTCCGAAAGCTGTGGTTTATTCCCAGTTCTAATGAAATGGGACAAACTTTATGCAGgAATCCAGAGGTTTTGGACATTGGTGCTCATGAAGTTCTTCCTCgattattgaaagaaaagttatCCAGTTCTTA 995 0.405 MAETERGSVATEGGAGERISLKDQGNEFFKAGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLNKAFDDADMTIKLKPQWEKGHFRKGCILEAMKRYDDALAAFQVALQYNPQSQEVSKKIKKINQLVRDRKRVEEVESMRSNIDMAKHLDKLKPELSGQYGSKECEKEIFSFLVETMETAVKSWHETSTVDARVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHGNCFSFLRQYAEESFSRAACLVAPKSIIAYPQVWKGQGSRKWKQGQNDGFFVQFESPSVRKLWFIPSSNEMGQTLCRNPEVLDIGAHEVLPRLLKEKLSSS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02085 331 Gene3D Tetratricopeptide repeat domain 18 131 IPR011990 GO:0005515
Bva05g02085 331 PANTHER TPR REPEAT CONTAINING PROTEIN 20 327 IPR045248 GO:0006457|GO:0030544|GO:0051879
Bva05g02085 331 ProSiteProfiles TPR repeat profile. 86 119 IPR019734 GO:0005515
Bva05g02085 331 Pfam Tetratricopeptide repeat 87 118 IPR013105 -
Bva05g02085 331 PANTHER STRESS-INDUCED-PHOSPHOPROTEIN 1 20 327 - -
Bva05g02085 331 SUPERFAMILY TPR-like 20 129 IPR011990 GO:0005515
Bva05g02085 331 Pfam TPR repeat 25 65 - -
Bva05g02085 331 ProSiteProfiles TPR repeat profile. 18 51 IPR019734 GO:0005515
Bva05g02085 331 SMART tpr_5 52 85 IPR019734 GO:0005515
Bva05g02085 331 SMART tpr_5 86 119 IPR019734 GO:0005515
Bva05g02085 331 SMART tpr_5 18 51 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02085 Bva-Chr5 15797678 15802207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02085 21 147 U-box Gene Family AT3G07370 27.907 8.09e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02085 - - gmx:100790717 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02085 05 15797678 15802207 Bva05g02085 05 15797678 15802207 ECH