Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02084 ATGGCCGTCGGAAAGAACAAGAGGATTTCCAAGGGAAAGAAAGGTGGCAAGAAGAAGGCTGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCTGTATTCCAAGTCAAAAATGTGGGCAAGACCCTTGTCACTCGTACTCAGGGAACCAAGATTGCTTCGGAAGGGCTCAAGCATAGAGTTTTTGAGGTCTCTCTGGCTGATCTTCAAGGTAATGACGAGGATCATGCATTCAGGAAGATTAGGTTAAGAGCTGAGGATGTTCAAGGGAGGAATGTTCTGACAAATTTCTGGGGAATGAATTTTACAACTGACAAATTGAGGTCATTGGTACGGAAATGGCAAACTTTAATAGAAGCTCATGTGGACGTGAAGACCACTGACAACTACACATTGAGGATGTTCTGCATCGGGTTTACAAAGAGACGTGCAAACCAGGTGAAGAGGACATGTTATGCACAAACAAGCCAGATTAGACAGATCCGCAGAAAGATGAAGGAAATCATGACTAACCAAGCTACATCATGTGATTTGAAAGAGTTGGTCCGCAAGTTCATTCCTGAGATGATCGGGAAAGAGATCGAGAAGGCCACATCCAGCATTTACCCTCTACAAAATGTGTTCATTAGGAAAGTCAAGATCTTGAAAGCTCCCAAGTTTGATCTTGGAAAATTGATGGAGGTTCATGGTGATTTTTCGGAAGATGTTGGTCAGAAGGTAGACAGACCTGCCGATGAGACAATGGCTGAGGGAACCACCGAAGTCGTTGGAGCTTG 788 0.4467 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGNDEDHAFRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQTSQIRQIRRKMKEIMTNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDFSEDVGQKVDRPADETMAEGTTEVVGA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02084 262 MobiDBLite consensus disorder prediction 1 20 - -
Bva05g02084 262 MobiDBLite consensus disorder prediction 1 15 - -
Bva05g02084 262 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 262 - -
Bva05g02084 262 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 262 - -
Bva05g02084 262 Hamap 40S ribosomal protein S1 [RPS3A]. 1 259 IPR027500 GO:0003735|GO:0005840|GO:0006412
Bva05g02084 262 ProSitePatterns Ribosomal protein S3Ae signature. 61 73 IPR018281 GO:0003735|GO:0005840|GO:0006412
Bva05g02084 262 SMART Ribosomal_S3Ae_2 15 222 IPR001593 GO:0003735|GO:0005840|GO:0006412
Bva05g02084 262 Pfam Ribosomal S3Ae family 16 222 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02084 Bva-Chr5 15795036 15797308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02084 1 262 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 85.551 6.35e-162 447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02084 05 15795036 15797308 Bva05g02084 05 15795036 15797308 ECH