Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02082 ATGGACACCCCAGAGAGGAACCAGATCGGCACTTCCATATCTAAATTCGAGGATTCTCCCGTATTCAGCTATATCAATAGTCTTTCTCCTATAAAGCCGGTTAAGTCTGTCCACATTACTCAGACATTCAACTCACTTAGTTTTCCGTCCCCTCCATCTGTTTTCACATCACCCCATGTCAATGGTCACAAGGGAACTAGATTTGCCCGAAGACAAAACCTTTTGGATGCCTCAAAGACTAAAGTTTTGTCTGAGGATGGACACAAAATCTCTTCAAGCAAAGAGGTTCTCGCAGATTCCACTCatccatataataataatataggaGAGCAACAGGGAGCTACTGATCAAGGAAATTCTGCAAAAGATACTTCAAGTGAACCATCTAATGAACAAACACAATTTGCAATCGAGCTACCACAAACCTTAAAATACGATTGTGGTAGCCCCGGTTATGATCCTGCACCCTGCAGTGATGAAACAAATAGTCTCGTGGAATTACCTGGCACCTCAGAGGTTGTGTATGTTCATGAAACCAGTAAAAATGATTCCACTGAGGATGAAGTGTCCTTAGAGAGAATGTGTCTGACTGAGCCAAAAATGGATGGCACAGAGTGTGAATGGAAATCATTGGATCCCACAATACGGTTTTGCAATGCTACATCTCAGTTACCAAAATCTAGCATCAATATTGGTAGGACGGTGCACATTGTTGATGCTGTTGCTTCTGGCCCAGACCATGATGTTGAAGAGGTTCTTCCTCAACCAGGCATAGCAACAGAAACGGACCAGACACAGGAAAATCTTGCCAATGTTGCTGTCGTGCCTAGCAATACCAATGAGAGAATGGATAATGAGCTTGTTTCTATGACATACCGTGGTTTGCGGAGGCGCTGCCTAGACTTTGAGATGGCTGCAGCTCGAAGGAGGAACCCAGCTGATGGTTCAAATACTGGTTCTGGTACATCTCAATCTGAAGAGAGCCATGTTGCTAAGCAGCTGCTTCCAACAAAACGCAGTGGTGATTCACAGAGATGCATTTTGCCAGGAATCGGTTTACACCTAAATGCTCTTGCAACTCTAAAAGACTATAAAAGCGtcgaaaatgaaaatttgtctTCTGGAAGAGAACTCAGTCTGCCCAGCTCTGCTTCTTTAGGCCAAGAACATCTTCCTCTGTCCTCAATATCAGCATATTCTGAAAGAGGTTTGGATACGCCAGACCCAGACAATGGGGTTCAGCCCGCAGAAGATTGTTCCCAGGTGTCTGCATACGCGGTCAATGAAGATTTCAATCAGAATAgccctaaaaagaaaagGCGTAAGTTGGAGCCAGATGCAGAAAGTGAGTCCTGCAAGCGATGTAATTGTAAGAAATCAAAGTGCTTGAAGCTTTACTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCTTGTTCCTGTCAAGATTGCTTCAACAAGCCTATTCATGAAGATACTGTGCTTGCAACTCGCAAGCAGATAGAGTCTCGCAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCTGATTCTGTACCTGAAGTTGGGGAGGATCCCAACAAAACTCCGGCTTCAGCACGACATAAAAGAGGATGTAACTGCAAGAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGCGTCGGTTGCTCCATTGGCTGTAGGTGCGAAGGATGTAAAAATGCTTATGGTAGGAAGGATGgTTCTGCCCCAGTAGGAACTGAAGCCGAACGCGAAGAAGAAACGGAAGCAAGTGAAAAAGGTTTGATGGAAAAAGCTTCTCGGAAAGCTgtttctcaaaataatgaagatCATCCAGACTCAGCTCTTCCCACAACACCATTAAGGCTTACCAGACCATTGATTCCATTGCCCTTTTCATCAAAGGGAAAGCCTCCTCGATCTTCCTTCATCACTACCATATCTGCTTCTGCATTGTACACTGCCCAGAAACTCGAGAAACCCAGCATTCTCCGGTCTCGGCCTAGGTTTGAAAAGCCTTTTCAAAGTGTTCCAGATGATGAAATGCCAGAACTTCTCCGAGACGATGGATCTCCTATCACTTGCATCAAAACTTCTTCTCCCAACAGCAAGAGGATTTCGTCTCCCAACTGTGAATTTGGATCATCTCCGACTCGCAGAAGTGGCAGAAAGTTAATATTACAATCCATcccttcatttccttctctgaCCCCTCACCATTA 2240 0.4286 MDTPERNQIGTSISKFEDSPVFSYINSLSPIKPVKSVHITQTFNSLSFPSPPSVFTSPHVNGHKGTRFARRQNLLDASKTKVLSEDGHKISSSKEVLADSTHPYNNNIGEQQGATDQGNSAKDTSSEPSNEQTQFAIELPQTLKYDCGSPGYDPAPCSDETNSLVELPGTSEVVYVHETSKNDSTEDEVSLERMCLTEPKMDGTECEWKSLDPTIRFCNATSQLPKSSINIGRTVHIVDAVASGPDHDVEEVLPQPGIATETDQTQENLANVAVVPSNTNERMDNELVSMTYRGLRRRCLDFEMAAARRRNPADGSNTGSGTSQSEESHVAKQLLPTKRSGDSQRCILPGIGLHLNALATLKDYKSVENENLSSGRELSLPSSASLGQEHLPLSSISAYSERGLDTPDPDNGVQPAEDCSQVSAYAVNEDFNQNSPKKKRRKLEPDAESESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRSSDSVPEVGEDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSIGCRCEGCKNAYGRKDGSAPVGTEAEREEETEASEKGLMEKASRKAVSQNNEDHPDSALPTTPLRLTRPLIPLPFSSKGKPPRSSFITTISASALYTAQKLEKPSILRSRPRFEKPFQSVPDDEMPELLRDDGSPITCIKTSSPNSKRISSPNCEFGSSPTRRSGRKLILQSIPSFPSLTPHH 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02082 746 MobiDBLite consensus disorder prediction 583 614 - -
Bva05g02082 746 MobiDBLite consensus disorder prediction 81 95 - -
Bva05g02082 746 ProSiteProfiles CRC domain profile. 451 576 IPR005172 -
Bva05g02082 746 MobiDBLite consensus disorder prediction 679 746 - -
Bva05g02082 746 MobiDBLite consensus disorder prediction 96 132 - -
Bva05g02082 746 MobiDBLite consensus disorder prediction 307 341 - -
Bva05g02082 746 MobiDBLite consensus disorder prediction 313 331 - -
Bva05g02082 746 SMART CXC_2 450 491 IPR033467 -
Bva05g02082 746 SMART CXC_2 536 577 IPR033467 -
Bva05g02082 746 MobiDBLite consensus disorder prediction 578 627 - -
Bva05g02082 746 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 539 574 IPR005172 -
Bva05g02082 746 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 453 488 IPR005172 -
Bva05g02082 746 MobiDBLite consensus disorder prediction 699 746 - -
Bva05g02082 746 MobiDBLite consensus disorder prediction 679 693 - -
Bva05g02082 746 MobiDBLite consensus disorder prediction 80 132 - -
Bva05g02082 746 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 746 IPR044522 GO:0003700
Bva05g02082 746 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02082 Bva-Chr5 15776253 15780817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02082 1 746 CPP Transcription Factor Family AT3G22780 42.342 2.69e-158 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Bva05g02082 TCR 4.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02082 - - gmx:100804447 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02082 05 15776253 15780817 Bva05g02082 05 15776253 15780817 ECH