Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02029 ATGAAGCACTTTATTGGCAGAGTAGACACTGACCCAGTCGTCCAAGCAAGTAAAAATGTCCCATTTTTGCTGCAGACTTTGGATGTGAAGATGCCATTGTCAACAGTTGATGATGGACATAGATTGTGTGCTGAGGCCCTGCATAGAGACTACGGTTCTAGCCTGGCCAAACTGATCAACATAATATGTGAGAGTATTCTCGTCTTTCCTCAATCTTCTAAATGCAGAATGGCTGACAGTGGAACCAGTGCCATAATTGGAATAGGGATTGATATTGGCACATCACAATCCAGTGTGGCCTTGTGGAATGGTTACCAAGTGGAGTTCTTGAAGGACTCGGTAAATCAGTCGATGATTGAATCATGCGTGACCTTCCTAGATGACCTCCCTTCTCGTGGACTTAGACGTCCCCGCACTCTTGTGGATGAAATGATTGCTGGAAACGCAATCTTCAACATGAAGCGCTTAATTGGCAGAATGGACAGTGACCCAATAGTCCAAGCAAGTAAAAATGTCCCATTTTTGGTGCAGACCTTGGACATTGGCATTCCTCCTTTTGTTGCAGCATTAGTGAACGAAAAGTGGAGATTCCACACTACAGAAGAAGCCCTGGCCACATTTCTCGTGGAACTAAGAATGATGGCCGAAGAACAGCTGAAACGACCACTAAGAAATGTTGCTGTTACTTTTCCTGTTTCATTCGGTCGATTCCAGCTGTGTCGGCTAGAACGTGCATGTGCCATGGCTGGCATTCATGTTCTCAGGTTGATGCCTGAACCAGCTGCAGTGGCTATGTTATATGGGCAGCAACAGCAAAAGGCTTCTCATGAGAAGATTgcattcattttcaatatgGGCGCTGGTTATACTGATGTTGCCGTTGCTGCTACTGGGGCAGGAATGACACGAATAATAGCCTTGGCAGGAAGTACTATTGGGGGAGAAGACTTGCTTCAAAATTTGATGCATCATATTTTCCCAGAATCCGATCGGTTTTTGAAGAGCCAtggaatgaaagaaattaaagcaatAGCCTTGCTTCGTTTTGAAGTTCAGCTTGCTATTCGCGGGCTTTGCAGTGAAACCAGTGCCCCGATTATTGTGGACTTGCATAATGGTCATAAGATATGCACGGACATTTTCAGGGACGAGTTTGAGGATGTGAACAGAAAAGTGTTTGAGAAATGGTATCACTG 1196 0.4373 MKHFIGRVDTDPVVQASKNVPFLLQTLDVKMPLSTVDDGHRLCAEALHRDYGSSLAKLINIICESILVFPQSSKCRMADSGTSAIIGIGIDIGTSQSSVALWNGYQVEFLKDSVNQSMIESCVTFLDDLPSRGLRRPRTLVDEMIAGNAIFNMKRLIGRMDSDPIVQASKNVPFLVQTLDIGIPPFVAALVNEKWRFHTTEEALATFLVELRMMAEEQLKRPLRNVAVTFPVSFGRFQLCRLERACAMAGIHVLRLMPEPAAVAMLYGQQQQKASHEKIAFIFNMGAGYTDVAVAATGAGMTRIIALAGSTIGGEDLLQNLMHHIFPESDRFLKSHGMKEIKAIALLRFEVQLAIRGLCSETSAPIIVDLHNGHKICTDIFRDEFEDVNRKVFEKWYH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02029 398 PANTHER HEAT SHOCK PROTEIN 70KDA 80 396 IPR013126 GO:0005524|GO:0140662
Bva05g02029 398 PANTHER HEAT SHOCK PROTEIN 70KDA 1 30 IPR013126 GO:0005524|GO:0140662
Bva05g02029 398 Gene3D Actin; Chain A, domain 4 313 395 - -
Bva05g02029 398 Pfam Hsp70 protein 88 395 IPR013126 GO:0005524|GO:0140662
Bva05g02029 398 CDD HSP70_NBD 94 395 - -
Bva05g02029 398 Gene3D - 88 271 - -
Bva05g02029 398 Gene3D - 151 206 - -
Bva05g02029 398 SUPERFAMILY Actin-like ATPase domain 88 270 IPR043129 -
Bva05g02029 398 Gene3D - 272 312 - -
Bva05g02029 398 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 80 396 - -
Bva05g02029 398 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 1 30 - -
Bva05g02029 398 SUPERFAMILY Actin-like ATPase domain 277 396 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02029 Bva-Chr5 15459045 15462057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02029 88 395 Calmodulin-binding Proteins AT3G12580 33.333 6.97e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02029 K09489 - gmx:100809773 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02029 05 15459045 15462057 Bva05g02029 05 15459045 15462057 ECH