Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02014 ATGGATCTTCAGAGGCGCCAAGATCAGTGCGTCCCTGAGAGGAAAGGGCAGAAGCGGAAGCTGGAGGAGGAATAcgaagaggagagagagatcTCGGCTGCGCCACCCACCGGCGACGCACGGGAGGCGCTGCTCGCTGATGTGAGTGCGCAGGTTGATGTCCTAGACTCTACTTTCTCTTGGAAGGAAGCCGATCGAGCCGCGGCTAAGCGCGCCACTCACGTCCTTGCTGAGCTTGCTAAGAATGAGGAAGTAGTGAACGTGATTGTCGAAGGAGGCGCAATTCCGGCGTTGGTTAAGCATCTACAAGCGCCGCCCTTGAGTGAAAATGATCGCAGTCCGAAGCCATTTGAGCACGAGGTTGAGAAAGGGAGTGCTTTTGCTCTAGGTCTTCTAGCCGTCAAGCCAGAACATCAACAACTAATAGTTGAAAATGGTGCATTAAAACATCTTGTTGATCTGTTGAAGAGGCATAAGAATTCTTCTACTTCTCGTGCTGTGAATAGTGTCATTCGTAGGGCTGCAGATGCGATCACTAATCTTGCGCATGAGAACAGCAGCATTAAAACACGTGTCAGGATGGAAGGTGGGATTCCGCCCCTTGTTGAGTTGCTAGAATTTACTGATACAAAGGTGCAAAGAGCAGCTGCTGGTGCACTGCGAACCCTGGcttttaaaaatgatgaaaataaaaatcagATTGTTGAATGCAATGCTCTACCAACACTCATTCTAATGCTTCGTTCTGAAGATGCTGCTATTCATTATGAAGCGGTTGGCGTGATTGGAAATCTGGTGCACTCTTCCCctaatataaagaaagaggTTCTTCTTGCTGGTGCTTTACAACCTGTCATTGGTTTACTTAGCTCCTGCTGCTGTGAGAGCCAAAGAGAAGCTGCCTTGTTACTTGGACAGTTTGCAGCAACTGATTCAGACTGTAAGGTTCACATTGTGCAAAGAGGTGCTGTCCGACCTCTGATAGACATGCTTCAGTCCCCTGATGTGCAACTTAGAGAAATGTCTGCCTTTGCATTGGGGAGATTAGCGCAGGATACACATAACCAAGCTGGTATTGCTTACAATGGTGGTTTAATGCCATTACTGAAACTTCTTGACTCAAAGAATGGGTCTTTGCAACATAATGCTGCTTTTGCCCTTTATGGACTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTAGGTGGTGTTCACAGACTACATGATGGAGAATTTATTGTTCAAGCTACAAAAGACTGTGTTGCAAAGACATTGAAAAGAATAGAGGAGAAGATTCATGGGCGTGTACTGAACCATTTGTTATATCTAATGCGAGTTTCAGAAAAAGCTGTCCAAAGACGAGTTGCTTTGGCTCTTGCTCATCTTTGTTCTGCGGAGGACCAGAGGACCATATTCATTGATAACAGCGGTTTGGAGTTGCTCATTGGGCTTCTTGGCTCCTCTAGCCCTAAGCAACAACTTGATGGTGCTGTGGCTTTATGCAAGTTGGCCAACAAAGCCATGACTCTATCTCCCATGGATGCTGCTCCTCCTTCGCCAACACCTCAGGTCTATTTGGGAGAGCAGTATGTAAACAATGCTACGTTATCTGATGTTACATTTTTAGTTGAAGGCAAACGCTTTTATGCTCACAGAATCTGCCTGCTTGCTTCATCTGATGCTTTTCGGGCAATGTTTGATGGCGGTTATAGGGAGAAGGATGCTAGGGATATAGAGATTCCAAATATCAGATGGGAGGTTTTTGAGTTGATGATGAGATTCATTTATACCGGATCAGTAGATATTACTCTTGATATTGCCCAAGATCTCCTCCGAGCAGCTGATCAATATCTCTTAGAAGGACTTAAGCGACTTTGTGAGTACACTATTGCACAGGATATATCACTGGTGAATGTATCATGTATGTATGAACTTTCAGAAGCCTTCAATGCAATATCATTAAGGCACACATGCATCCTTTTTATATTGGAgcaatttgataaattgagtGCCAGGCCAGGGCACTCCCATCTGATTCAGCGTATAACACCAGAGATCCGCAATTACTTTACAAAGCATATGTCGAACCTAGGGAGGGAGGCTCCTTCATTGAGTCTTGGCATTGGAATGGCAAATTTCTG 2147 0.4383 MDLQRRQDQCVPERKGQKRKLEEEYEEEREISAAPPTGDAREALLADVSAQVDVLDSTFSWKEADRAAAKRATHVLAELAKNEEVVNVIVEGGAIPALVKHLQAPPLSENDRSPKPFEHEVEKGSAFALGLLAVKPEHQQLIVENGALKHLVDLLKRHKNSSTSRAVNSVIRRAADAITNLAHENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCCESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIDMLQSPDVQLREMSAFALGRLAQDTHNQAGIAYNGGLMPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGVHRLHDGEFIVQATKDCVAKTLKRIEEKIHGRVLNHLLYLMRVSEKAVQRRVALALAHLCSAEDQRTIFIDNSGLELLIGLLGSSSPKQQLDGAVALCKLANKAMTLSPMDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDITLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLVNVSCMYELSEAFNAISLRHTCILFILEQFDKLSARPGHSHLIQRITPEIRNYFTKHMSNLGREAPSLSLGIGMANF 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02014 715 MobiDBLite consensus disorder prediction 1 35 - -
Bva05g02014 715 Pfam BTB/POZ domain 532 634 IPR000210 GO:0005515
Bva05g02014 715 SUPERFAMILY ARM repeat 70 408 IPR016024 -
Bva05g02014 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 196 231 IPR000225 GO:0005515
Bva05g02014 715 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 9 698 - -
Bva05g02014 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 146 196 IPR000225 GO:0005515
Bva05g02014 715 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 9 698 IPR044282 -
Bva05g02014 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 93 147 IPR000225 GO:0005515
Bva05g02014 715 SMART BTB_4 539 636 IPR000210 GO:0005515
Bva05g02014 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 322 364 IPR000225 GO:0005515
Bva05g02014 715 SUPERFAMILY POZ domain 531 633 IPR011333 -
Bva05g02014 715 ProSiteProfiles BTB domain profile. 539 606 IPR000210 GO:0005515
Bva05g02014 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 238 280 IPR000225 GO:0005515
Bva05g02014 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 363 405 IPR000225 GO:0005515
Bva05g02014 715 Pfam Armadillo/beta-catenin-like repeat 192 224 IPR000225 GO:0005515
Bva05g02014 715 Pfam Armadillo/beta-catenin-like repeat 227 266 IPR000225 GO:0005515
Bva05g02014 715 Pfam Armadillo/beta-catenin-like repeat 311 350 IPR000225 GO:0005515
Bva05g02014 715 CDD BTB_POZ_ARIA_plant 526 641 - -
Bva05g02014 715 Gene3D - 412 521 IPR011989 -
Bva05g02014 715 MobiDBLite consensus disorder prediction 1 39 - -
Bva05g02014 715 Gene3D Potassium Channel Kv1.1; Chain A 522 665 IPR011333 -
Bva05g02014 715 SUPERFAMILY ARM repeat 437 508 IPR016024 -
Bva05g02014 715 SMART arm_5 352 392 IPR000225 GO:0005515
Bva05g02014 715 SMART arm_5 467 507 IPR000225 GO:0005515
Bva05g02014 715 SMART arm_5 135 183 IPR000225 GO:0005515
Bva05g02014 715 SMART arm_5 311 351 IPR000225 GO:0005515
Bva05g02014 715 SMART arm_5 227 267 IPR000225 GO:0005515
Bva05g02014 715 SMART arm_5 269 309 IPR000225 GO:0005515
Bva05g02014 715 SMART arm_5 185 225 IPR000225 GO:0005515
Bva05g02014 715 SMART arm_5 82 134 IPR000225 GO:0005515
Bva05g02014 715 Gene3D - 48 411 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02014 Bva-Chr5 15357598 15363723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02014 295 409 U-box Gene Family AT3G46510 29.915 3.65e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva05g02014 BTB 3.4e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02014 - - tcc:18602941 1221.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02014 05 15357598 15363723 Bva05g02014 05 15357598 15363723 ECH