Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02007 ATGCAAGAGTTTCTGGGATCGGTTCGCCGATCCTTGGTTTTCAGAAGCACAAGCAGCGACGATGGGGGATTTGGCGGTCTCGTTGATAAGATTGGTTCCAACATTCGCAAATCGCGAATTGGGCTGTTCACTCAGCCAAGAGTCAGGGCTCTTCCGCCGGTTCCCAAAGACAACGCGCCTACGATCCGGTGGCGGAAGGGCGAGTTAATTGGTTGTGGTGCGTTTGGCCGGGTCTATATGGGAATGAAACTTGATTCTGGAGAGCTTATTGCTGTAAAGCAGGTTTTAATCGCGGCAAAGAACGcttcaaaagagaaaacgCAGGCTCATATTCGGGAGCTCGAAGAAGAAGTGAAGCTTCTGAAGAATCTCAAACACCCAAATATTGTTAGGTACTTGGGAACTGCTAGAGAGGAGGATTCCTTGAATATTCTCTTGGAATTTGTACCTGGTGGATCGATCTCATCACTATTGGGGAAATTTGGATCCTTCCCCGAGTCTGTTATACAAATGTATACGAAACAACTATTACTGGGCCTTGAATATCTTCACAAGAATGGAATTATTCACAGGGATATTAAGGGTGCAAATATTCTAGTTGATAATAAAGGATGCATTAAGCTCGCAGACTTTGGTGCATCCAAGAAAGTTGTTGAGCTGGCTACCGTTAACGGAGCAAAATCAATGAAGGGCACTCCATATTGGATGGCTCCTGAAGTTATTCTGCAGACAGGACATAGCTTctCTGCTGATATATGGAGTGTTGGTTGTACTGTGATAGAGATGGCCACTGGCAAGCCTCCATGGAGCCAACAGTATCAGGAGgtTGCTGCTCTTTTCCACATTGGGACAACTAAATCTCATCCACCCATACCTGAACATCTTTCTGCTGAGGCAAAggattttttgttaaaatgctTACAGGAGGAACCAAATCTACGGCCATCTGCATCAGAATTATTACAGCATCCATTTATCACGGCCCACTATCAGGACACACATCCAACTTTATGCAGTTCTGTTGGGGAGCCTTGTAATCCAATGGAAGCATCTGGGATGAACTCTAGAAACTTGGAACCGACCTGCACAAGTCTAAAGGATATCTGTCAGATGGATAGCATTAGGTGCTCAACTGTATATCCTGAAAGTCTTCTGAAAGCAGGTTCCTACCGACGAgtagatgatgatgatgacatGTGTCAGATTGATGATCAAGATGATCTTGTGGTTGGTACATTAGGAAAGTCAAAGTCTTTCTTTGCATCTGATGACATAAAGAGTTTCAATCCTATGTGTGAACCTACTGATGAGTGGCCATGCAAGTTTGATGAAAATCTAAGTGTGGAGAAAAGCAGAGTGAACTTGTCCCCTGATCAAACAATGAGCAACACTCAAAGAAGCCCTGAAGTATCTCCAGAGATGGAGAACTCTCTTCCAAGTGAACCTTTAGGTGCtgaggatgatgatgaagtCACTGAGTCAAAAATTAGAGCTTTCCTGGATGAAAAGGCATTGGAactgaagaaacaccaaacaGAATTCTTTAGTGCATCGAATGCAGCTGTTCCTCCTGCATCTGTTGCCAGTGCCCACAGTGAAATTGTTTCAGATGCCTTGAATGTAACACCAAATAACAAATCACCTAGTCAGGCTAGCAGACGATTCTCAGTTGCTATTGGTGCCAATCTTGCACGTTCTGGTAGTCATAGTAGATATCGATCAAAAGCTAGTGGTGCATATGGTCGGCCTTTGCAGGAAATCCAGCCATCTGAGCTCAACGAGTGGAAAGAAGTTCTTCATGATTCTCAGATGGAATCATTTAGTGTTAGATCTAGCTGCTCTGAGATACAGCAGAAATGGAAAGAAGAACTTGCTGAAGAGCTTGAGAGGAAACGAGAGATGATGCGTCAGGCAGGCCTAGGAGGGAAGGTAACATCCCCAAAGGATCGCAATTTTCATAAGCAGACTAATCCAGGGGAAGATCCACCTTCTAACTTGTGGgatattaataagaataaata 2021 0.4211 MQEFLGSVRRSLVFRSTSSDDGGFGGLVDKIGSNIRKSRIGLFTQPRVRALPPVPKDNAPTIRWRKGELIGCGAFGRVYMGMKLDSGELIAVKQVLIAAKNASKEKTQAHIRELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIQMYTKQLLLGLEYLHKNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATVNGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEHLSAEAKDFLLKCLQEEPNLRPSASELLQHPFITAHYQDTHPTLCSSVGEPCNPMEASGMNSRNLEPTCTSLKDICQMDSIRCSTVYPESLLKAGSYRRVDDDDDMCQIDDQDDLVVGTLGKSKSFFASDDIKSFNPMCEPTDEWPCKFDENLSVEKSRVNLSPDQTMSNTQRSPEVSPEMENSLPSEPLGAEDDDEVTESKIRAFLDEKALELKKHQTEFFSASNAAVPPASVASAHSEIVSDALNVTPNNKSPSQASRRFSVAIGANLARSGSHSRYRSKASGAYGRPLQEIQPSELNEWKEVLHDSQMESFSVRSSCSEIQQKWKEELAEELERKREMMRQAGLGGKVTSPKDRNFHKQTNPGEDPPSNLWDINKNK 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02007 673 Coils Coil 617 637 - -
Bva05g02007 673 PANTHER MAP KINASE KINASE KINASE 47 542 - -
Bva05g02007 673 ProSiteProfiles Protein kinase domain profile. 64 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02007 673 CDD STKc_MAPKKK 63 326 - -
Bva05g02007 673 MobiDBLite consensus disorder prediction 635 673 - -
Bva05g02007 673 Gene3D Transferase(Phosphotransferase) domain 1 63 355 - -
Bva05g02007 673 MobiDBLite consensus disorder prediction 657 673 - -
Bva05g02007 673 Coils Coil 97 124 - -
Bva05g02007 673 SMART serkin_6 64 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02007 673 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 47 542 - -
Bva05g02007 673 MobiDBLite consensus disorder prediction 451 474 - -
Bva05g02007 673 SUPERFAMILY Protein kinase-like (PK-like) 63 355 IPR011009 -
Bva05g02007 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Bva05g02007 673 MobiDBLite consensus disorder prediction 451 490 - -
Bva05g02007 673 ProSitePatterns Protein kinases ATP-binding region signature. 70 100 IPR017441 GO:0005524
Bva05g02007 673 Pfam Protein kinase domain 65 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02007 Bva-Chr5 15281959 15287178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02007 1 644 MAP Kinase Kinase Kinase AT3G06030 58.308 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva05g02007 Pkinase 4.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02007 - K20606 qsu:112023521 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02007 05 15281959 15287178 Bva05g02007 05 15281959 15287178 ECH