Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01992 ATGGATCAACACCATCAAGGACTGCCCAAAGGAGGGGTGGCTGGTTCTGCAGCACAAGCATCATATGGCAAGAATCAATACCAATCTAACCAAACAATGGCACCTGCTGCTACTCATTCTTCTCCTGACGTGCCAGGCCTGCCTGGCTCTTCATCCTACCTGAGAGAGCATCAGCTTGCTCAACAGTACATGCACCAGCTGCAGCAGCAAGAGTTGCAGCAACAACTCCAAAACTTCTGGGCAAATCAAATCCAAGAAATCGAGCAAGTTGTTGACTTCAAAACCCACAGCTTGCCTTTGGCTAGGATTAAGAAGATCATGAAGGCTGATGAGGATGTGAGGATGATATCGGCCGAAGCCCCTGTCATCTTTGCCAGGGCCTGTGAAATGTTCATTCTGGAGCTGACACTGAGGTCTTGGATTAACGCGGAAGAAAACAAGAGGAGAACTCTTCAGAAGAATGACATAGCAGCAGCAATCACAAGAACTGATGTGTTTGATTTTCTGGTTGATATTGTTCCTAGGGATGACTTGAAAGATGACATCTACGCAGGCATCAAAAGACCAAGCAATGCTGCAGTTGGAGGCCCAGCTGAGAATGCTACTTACCATTATATGCCACCACAGCATGTTCCAACTCCATATGGAGCTCCAAGAATGATTATGGGTATGCCTGTAGTTGATCAAGCTCATCATTATGGGCAGCAAACCCACCCTTATCCAGCTCAAATGTGGCCTCAACAGCAGAATCCTCCTGCAGATTCAGATTCATA 773 0.4683 MDQHHQGLPKGGVAGSAAQASYGKNQYQSNQTMAPAATHSSPDVPGLPGSSSYLREHQLAQQYMHQLQQQELQQQLQNFWANQIQEIEQVVDFKTHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWINAEENKRRTLQKNDIAAAITRTDVFDFLVDIVPRDDLKDDIYAGIKRPSNAAVGGPAENATYHYMPPQHVPTPYGAPRMIMGMPVVDQAHHYGQQTHPYPAQMWPQQQNPPADSDS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01992 257 Pfam Core histone H2A/H2B/H3/H4 68 160 IPR007125 GO:0003677
Bva05g01992 257 MobiDBLite consensus disorder prediction 25 51 - -
Bva05g01992 257 MobiDBLite consensus disorder prediction 236 257 - -
Bva05g01992 257 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 1 250 - -
Bva05g01992 257 SUPERFAMILY Histone-fold 59 169 IPR009072 GO:0046982
Bva05g01992 257 MobiDBLite consensus disorder prediction 240 257 - -
Bva05g01992 257 Gene3D Histone, subunit A 59 175 IPR009072 GO:0046982
Bva05g01992 257 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01992 Bva-Chr5 15220629 15222575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01992 15 251 CCAAT-HAP5 Transcription Factor Family AT1G54830 55.274 8.43e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva05g01992 CBFD_NFYB_HMF 4.7e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01992 K08066 - jre:109010478 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01992 05 15220629 15222575 Bva05g01992 05 15220629 15222575 ECH