Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01989 ATGAGAGGATGCAAGCAGGACTTTCCTCCACAAAGTTGTGACGAAGCTCACCCAGAttcaaatgattttgatttcagTGTCCTGGACGGAATTAACTGGCCTGGATCTGACATTAAGAACTATACACAAGTAAGTGAGGAGTGGTGCAGACAGGAATGCTTGCGTGATTGTCACTGTGCGGTTGCTTTTTACAGATCACATGATATGATGTGTTGGAAGAAGGAGTTACTCCTCTCTTACGGAAGAGATCAAGGGGAAAATGATGTAAAATCTTTTgtcaagaaaaggaaaaacaattcTACTCGAAAGAATGATCAATCAATATTTGTAATGATTGGATTAGTCCTTTTAGGCTGTTTAGTGATCCTTTTGGTGCCAGGTATTTTGTTTGCATACTGGTCTAGACACAGGAAATGTAAGGTATGCCGAACTTACCAATTCAAGGATGGCATGAACCTCAGAAATTTCACTTATGAAGAGTTGAGCAAAGCAACAGATGGATTCAAGGAAGAAGTGGGTCGTGGTGTATCTGCAATAGTTTACAAAGGAGTCCTATTGGATGGTAATCAGAACGTCATTGCTGTGAAAAGGTTGAACAATATGGCGAATAAATATGAGGAGGAGTTTAAAGCAGAGGTAACTGCAATTGGTCGAACACATCATCGGAACTTGGTCCAACTCTTAGGATTCTGTGATGAAGGAGAGCATAAGCTACTTGTGTATGAATACATGAGGAATGGATCTTTGGCAAAGTTCATTTTTGATTCCAAGAGGCCAAGATGGTACCAAAGAGTGCAAATTGCATTAGGGACAGCAAGAGGACTCTTGTACTTGCATGAAGAGTGCCACGGCAAGATCATACACTGTGATGTTAAGCCTCAAAATGTTCTTCTTGATGACTCTTACACAGCCAAAATCTCTGATTTTGGATTAATAAAGCCATTGAAGACAGATCAGACGTTGACAAATACTATCAAAAGAGGAACAAAAGGGTATATTGCTCCAGAATGGTCCCAAGGCATGCCAGTTAGCTCCATGGTAGATGTTTACAGCTACGGAGTATTGTTGGTGGAGCTAATATGCTGCAGGAGGAACTTTGGGAATGAGAACCAAATGGCCCTGGTAAATTGGGCATATGATTGCTTTAAGGATAAGAAACTGAATATGCTGTTGAAAGATGATAAAGAGGCGCTGGATGACATTAAAAGGGTGGAGAAGTATCTGATGATTGCTTTCTGGTGCATTCAGGAAAATGCTGCATCAAGACCAACCATGATGAAAGTCTTTCGGATGCTGGATGGAGTTGTTGATGTTGAATTTCCCTCAAATCCAAACTATGTAGCGAGACAATTTTG 1355 0.397 MRGCKQDFPPQSCDEAHPDSNDFDFSVLDGINWPGSDIKNYTQVSEEWCRQECLRDCHCAVAFYRSHDMMCWKKELLLSYGRDQGENDVKSFVKKRKNNSTRKNDQSIFVMIGLVLLGCLVILLVPGILFAYWSRHRKCKVCRTYQFKDGMNLRNFTYEELSKATDGFKEEVGRGVSAIVYKGVLLDGNQNVIAVKRLNNMANKYEEEFKAEVTAIGRTHHRNLVQLLGFCDEGEHKLLVYEYMRNGSLAKFIFDSKRPRWYQRVQIALGTARGLLYLHEECHGKIIHCDVKPQNVLLDDSYTAKISDFGLIKPLKTDQTLTNTIKRGTKGYIAPEWSQGMPVSSMVDVYSYGVLLVELICCRRNFGNENQMALVNWAYDCFKDKKLNMLLKDDKEALDDIKRVEKYLMIAFWCIQENAASRPTMMKVFRMLDGVVDVEFPSNPNYVARQF 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01989 451 Gene3D Transferase(Phosphotransferase) domain 1 244 442 - -
Bva05g01989 451 ProSiteProfiles Protein kinase domain profile. 166 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01989 451 PANTHER LOW QUALITY PROTEIN: G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 1 447 - -
Bva05g01989 451 SUPERFAMILY Protein kinase-like (PK-like) 151 432 IPR011009 -
Bva05g01989 451 ProSitePatterns Protein kinases ATP-binding region signature. 172 196 IPR017441 GO:0005524
Bva05g01989 451 Pfam PAN-like domain 24 75 IPR003609 -
Bva05g01989 451 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 447 IPR045874 GO:0004672
Bva05g01989 451 Gene3D Phosphorylase Kinase; domain 1 131 243 - -
Bva05g01989 451 Pfam Protein kinase domain 169 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01989 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Bva05g01989 451 SMART serkin_6 166 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01989 Bva-Chr5 15201564 15202919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01989 117 437 Receptor kinase-like Gene Family AT5G45780 37.685 6.94e-63 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva05g01989 Pkinase 8.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01989 - - qsu:112025547 506.523