Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01984 ATGGATCAATTTGATGAATCAATGAGGAAACAAATAGACGCACTTTGGCGGGTTATAAATGTAGCAAGATGCTACAGAGAGGATATTTCTCCTTGCAAAATTGAAGAGGGTCTCTTTCTGGGTTCAGTTGGTGCTGCAACTAACAAGAGTGCACTAAAAGCCTTGAATATTACTCACATTTTAACTGTTGCTAGTACGTTGGCACCTGCACATCCTAACGATTttgtgtataaaattatacaagTTGCTGATAGAACCGACACCAACCTTAGAGAACACTTTGATGAGtgttttcatttcattgatGAAGCTAAAAGACTTGGAGGAGGGGTTCTAGTTCATTGCTTTGTTGGAAGATCCAGGAGTGTAACTATAGTTGTTGCATATCTGATGAAGACACGTCGGATGACCTTAACACAAGCTCTGCAACATGTGAAGAGCATACGACCCGTAGCAGCTCCCAATCCTGGTTTCATGAGTCAGCTGGAGGCATTTGAAAAGTCCCTCCAAGtaacaaatta 521 0.3896 MDQFDESMRKQIDALWRVINVARCYREDISPCKIEEGLFLGSVGAATNKSALKALNITHILTVASTLAPAHPNDFVYKIIQVADRTDTNLREHFDECFHFIDEAKRLGGGVLVHCFVGRSRSVTIVVAYLMKTRRMTLTQALQHVKSIRPVAAPNPGFMSQLEAFEKSLQVTN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01984 173 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 25 170 IPR029021 -
Bva05g01984 173 Gene3D Protein tyrosine phosphatase superfamily 32 173 IPR029021 -
Bva05g01984 173 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 92 150 IPR000387 GO:0016311|GO:0016791
Bva05g01984 173 Pfam Dual specificity phosphatase, catalytic domain 38 167 IPR000340 GO:0008138|GO:0016311
Bva05g01984 173 ProSiteProfiles Dual specificity protein phosphatase domain profile. 30 171 IPR020422 GO:0006470|GO:0008138
Bva05g01984 173 SMART dsp_5 30 168 IPR020422 GO:0006470|GO:0008138
Bva05g01984 173 CDD DSP 31 163 - -
Bva05g01984 173 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 8 172 - -
Bva05g01984 173 PANTHER BNAA01G23680D PROTEIN 8 172 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01984 33 170 Protein tyrosine phosphatase (PTP) family AT3G06110 61.594 6.95e-61 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01984 - - qsu:112023201 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01984 05 15178981 15183271 Bva05g01984 05 15178981 15183271 ECH