Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01983 ATGTCTCACATAGTAGTCGAGAGGAAAAGGAGAAGACAGATGAATGAACATCTCAAAGTCTTAAGGTCCTTGACCCCATGTTTCTATATCAAAAGGGGAGATCAAGCATCTATAATAGGGGGTGTAATAGAATTCATCAAGGAGTTATGCCAAGTTCTCCAAGCTTTAGAATCCAAGAAACGAAGGAAGAGTTTGAGCCCCAGCCCTGGTCCCAGCCCTAGTACTCCAAGAACACTCTTGCAGCCAACCCTACAACTTGATAGCCCCTTTGGAAATGGGGCTGACTCTTCTAAGGAACTAGGAGTAAGCTGCAACTCCTCAGTTGCAGATGTGGAAGTGAAAATTTCGGGGCCAAACGTGATTCTGAAAGTGATCTCTCACAGAATTCCGGGTCAAGTTGCTAAGATAATCACTGTTTTGGAAAGGCTTTCGTTTGAAGTCCTTCATCTGAACATCAGTAGCATGGAGGATACAGTTCTTTATCACTTTGTTGTCAAGATAGGGCTGGAATGTCAACTAAGTCTGGAGGAACTAGCAATGGAAATACAAAAGAGCTTCTGCCTAGATGCTGTTAATTA 578 0.4308 MSHIVVERKRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELCQVLQALESKKRRKSLSPSPGPSPSTPRTLLQPTLQLDSPFGNGADSSKELGVSCNSSVADVEVKISGPNVILKVISHRIPGQVAKIITVLERLSFEVLHLNISSMEDTVLYHFVVKIGLECQLSLEELAMEIQKSFCLDAVN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01983 192 PANTHER TRANSCRIPTION FACTOR MUTE 1 190 - -
Bva05g01983 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 68 IPR036638 GO:0046983
Bva05g01983 192 MobiDBLite consensus disorder prediction 61 81 - -
Bva05g01983 192 SMART finulus 4 55 IPR011598 GO:0046983
Bva05g01983 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Bva05g01983 192 PANTHER TRANSCRIPTION FACTOR FAMA 1 190 IPR044283 GO:0003700|GO:0010052
Bva05g01983 192 Gene3D - 1 64 IPR036638 GO:0046983
Bva05g01983 192 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01983 Bva-Chr5 15175566 15177178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01983 1 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 65.327 2.52e-83 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva05g01983 HLH 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01983 - - gmx:100785890 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01983 05 15175566 15177178 Bva05g01983 05 15175566 15177178 ECH