Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01977 atgaatatttttatttccctGTCATCTGTCTGCAACCAAGTACAGCCCCAGCTAGTGAATTTCCAAGGGGGACAGGGACTCAGAATGGACCCTTTCTTCCACCGTAAGGATAAGGTGGTGGTGATAATGGGCGGCACCGGCACCGGCAAGTCTCGCCTCGCCATCGACTTGGCCACCCGTTTCTTCCCGGCGGAGGTCGTGAATTCCGATAAAATGCAAGTCTACAAGGGACTCGACATTACCACCAACAAGGTAACCGAGGAAGAGTGTCGTGGGGTCCCACACCATTTGCTGAGCATAGCTGATTCCGACTCCAATTTCACTGCTACTGATTTTTGCCACGAAGCCAACGTCGCCATCGATTCCATCGTTGAAAGGGACAGATTACCCATCATTGCCGGTGGGTCCAATTCCTACATCGAAGCTCTTGTGAACGATGATGCCGAGTTTCGGTTAAGGTACGAGTGTTGCTTCCTCTGGGTCGATGTATCGCTACCCGTGCTGGATTCCTTTGTGTCGGAGAGGGTTGATCGAATGGTTAAGGCTGGTCTTGTCGACGAGGTTCGCCAACTGTTTGATTTTTCCTCGGATTACACGAGAGGTAACAGAAGGGCCATTGGGGTCCCTGAATTGGACCAGTTCCTCAGAACAGAGGCCACGGCCGATGAAAGAACCAGGAAAAGGTTGCTGGAGGACGCCATTTCCAGGATCAAGGTCAATAATTGCGTGCTTGCTCGTCGCCAGCTGCAGAAAATTCTTCGCCTTTATAGGATTTGGGAATGGAACATGCATCGCCTTGACGCCACTGAAGTCTTCAAGGAAACAGGGGAAGAAGCAGAGGAGGCTTGGGGGAAGCTATTGGCGCGGAGCAGGAGGATCGTCGGAGACTTCCTCCACGAAGAAAAACCTCTTCCAGCTTCGGCCAAGACAGCCGCCCGAATGCCGGCGCCGTCAAATGCAGTAGCGATGGTCGCAGCAACCCTTTA 986 0.5193 MNIFISLSSVCNQVQPQLVNFQGGQGLRMDPFFHRKDKVVVIMGGTGTGKSRLAIDLATRFFPAEVVNSDKMQVYKGLDITTNKVTEEECRGVPHHLLSIADSDSNFTATDFCHEANVAIDSIVERDRLPIIAGGSNSYIEALVNDDAEFRLRYECCFLWVDVSLPVLDSFVSERVDRMVKAGLVDEVRQLFDFSSDYTRGNRRAIGVPELDQFLRTEATADERTRKRLLEDAISRIKVNNCVLARRQLQKILRLYRIWEWNMHRLDATEVFKETGEEAEEAWGKLLARSRRIVGDFLHEEKPLPASAKTAARMPAPSNAVAMVAATL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01977 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 272 IPR027417 -
Bva05g01977 328 Gene3D - 36 298 IPR027417 -
Bva05g01977 328 Hamap tRNA dimethylallyltransferase [miaA]. 39 273 IPR018022 GO:0008033
Bva05g01977 328 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 165 263 - -
Bva05g01977 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 149 IPR027417 -
Bva05g01977 328 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 29 302 - -
Bva05g01977 328 Pfam IPP transferase 152 250 - -
Bva05g01977 328 Pfam IPP transferase 73 146 - -
Bva05g01977 328 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 302 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01977 Bva-Chr5 15112007 15113940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01977 153 313 C2H2 Transcription Factor Family AT2G27760 33.333 2.41e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01977 K10760 - tcc:18602885 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01977 05 15112007 15113940 Bva05g01977 05 15112007 15113940 ECH