Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01945 ATGGGTTGTGTCCATGGTAAGTGTTGTAGCCGCTACCCAGCACCATCTGAGGGCGGTTCCCGGGACTACAGAGAATTTGGTCTGTATCGTTCCCAAAGGAAGCACATACTAACTCAGAGATCATTGGAGTGTGTTCCTGTTCCTTCCCACAACTTCAGTTTAGAATACTCTGTTCTCACGCAGCGGGGATACTACCCAGACTCACCTGACAAAGAAAACCAAGACAGTTACTGCataaaaactcaaattcaaGGTAAACCAAGTGTCCATTTCTTTGGTGTCTATGATGGGCATGGTCAATTTGGTAGTCAGTGttcgaactttgttaaggatAGGTTGGTAGAAACATTGTCAAATGACCCTTCATTGTTGGATAACCCTGTTAAAGCTTATACTTCAGCATTCTTGACAACAAATTACGAATTACATAGCAGTGAGATTGATGATTCTATGAGTGGCACTACTGCTATTACGGTGCTTGTTATTGGAGACACCCTTTATGTTGCTAATGCTGGTGATTCGAGAGCAGTCATAGCTGTTAAGGATGGGAATCACATTATTGCTGAGGACCTGTCTTCTGATCAGACACCATTTCGGAGAGATGAATGCGAGAGAGTGAAACTTTGTGGTGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGCTCAAGGATCCGGATATCCAGACTTGGGGTGATGAAGAGAGTCAGGGTGGTGATCCTCCTAGACTGTGGGTTCCAAATGGGATGTATCCAGGAACTGCATTTACAAGGAGTTTGGGAGATAGTTTAGCAGAGACTATTGGTGTCATTGCTGTTCCAGAGGTGTCAATAGTTCAGCTTACGCCTaatcattctttctttattgttgCAAGTGATGGCGTATTTGAGTTCCTATCAAGCCAAACTGTTGTCGATATGGCAGCAAGCTATGTGGATCCCCGCGATGCGTGTGCTGCCATTGCTGGAGAGTCATATAAACTATGGTTGGAACATGAGAACCGAACTGATGATATAACTATTATCATTGTTCAGATCAAAGGCCTATCTAATTCTGGTGAGATAAATGTCGGTGCTGCAAGAAGGACCAAGAAGGGAACTTCTGAGATATCAGCTGCGACTGGGTCGGATGTTTATCGGTCTGTGAGGAGCGATTGCTCTGATTTACAGTCCTGTCAGCATGTGGTGTCACTGAGAAGCCCAGCCATAGTGGTCCCCGTCTCCAGCATGTCAAAGACCAAAACTGTGAATGAAGGAAGAGCCTTTTTTGAAGCTCTACCAAGTCTCCCTTGTAATTTCTCCCAAGTGAGCCACTTGAGGGGAACAAGAAACTCACCTTTCGGGGATGACACCATTCCTCCAGATTA 1364 0.4377 MGCVHGKCCSRYPAPSEGGSRDYREFGLYRSQRKHILTQRSLECVPVPSHNFSLEYSVLTQRGYYPDSPDKENQDSYCIKTQIQGKPSVHFFGVYDGHGQFGSQCSNFVKDRLVETLSNDPSLLDNPVKAYTSAFLTTNYELHSSEIDDSMSGTTAITVLVIGDTLYVANAGDSRAVIAVKDGNHIIAEDLSSDQTPFRRDECERVKLCGARVLSVDQVEGLKDPDIQTWGDEESQGGDPPRLWVPNGMYPGTAFTRSLGDSLAETIGVIAVPEVSIVQLTPNHSFFIVASDGVFEFLSSQTVVDMAASYVDPRDACAAIAGESYKLWLEHENRTDDITIIIVQIKGLSNSGEINVGAARRTKKGTSEISAATGSDVYRSVRSDCSDLQSCQHVVSLRSPAIVVPVSSMSKTKTVNEGRAFFEALPSLPCNFSQVSHLRGTRNSPFGDDTIPPD 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01945 454 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 24 420 - -
Bva05g01945 454 SMART PP2C_4 51 343 IPR001932 -
Bva05g01945 454 SUPERFAMILY PP2C-like 42 347 IPR036457 -
Bva05g01945 454 CDD PP2Cc 71 345 IPR001932 -
Bva05g01945 454 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Bva05g01945 454 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Bva05g01945 454 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 24 420 - -
Bva05g01945 454 Gene3D - 46 347 IPR036457 -
Bva05g01945 454 Pfam Protein phosphatase 2C 81 321 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01945 Bva-Chr5 14929525 14933810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01945 1 350 PP2C-type Phosphatase Gene Family AT3G06270 72.727 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01945 - - aprc:113872580 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01945 05 14929525 14933810 Bva05g01945 05 14929525 14933810 ECH