Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01920 ATGGACTGCAACAAAGAAGAGGCCGTAAGGGCCAAGAACATTGCCTTAATGAAGATGGAAAGCAGGGATTTCACAGGGGCTCGGAAATCAGCTCTTAAGGCGCAACAACTATATCCTGATCTGGAGAATATAGCTCAGATTCTTGTCGTGTGTGATGTGCATTGTTCAGCTGAGCAGAAATTGTTTGGTAATGAGATGGACTGGTATGGAATTCTTCAAATTGAGCAGACGGCCAATGATGCAACAATTAAGAAGCAATACAAGAAGTTTGCACTTTTACTTCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAACTGATTGGGGAAGCTTCAAGAGTGCTGACGGACAGGGATAAACGGGCTATACATGACATGAAGCGCAGAGCTTCTATGAATAAGCCTGCAATGTCACATCATCCGCCTCAGAAGGTTTATACAAACCTTAATGCTGGGATGCATAACAATGTCAGGAACAATTTTTCGAACTTGTATCCTCAGCATCCGCATCCACAGTATAGGCCACAAGGTCAGCCGTGGCCCTATAATGCACGCCCTCAGCATCAGCAGCAGTCTGGAAATCAGGAGCCGAATGGAATACACACTACTTTTTGGACTATCTGCCCATTTTGTGCTGTTAGATATCAGTATTATACAGAAGTTATGAATAAATCTCTTCGCTGCCAAAGTTGCAGGATGTCCTTTGTTGCTTATGACCTGAATGTGCAAGGTATGTCACCAACGACTAACGGGAACAGTGAGAAGTCCAATAGAGAGCCTCTCAAGAAGAAAGGCTCATCTCCTTATACTGTTTCTGGAGAGATGAATGGAAAGAGAAGGAGGAAGAAGGCAACAGAATCCAGTGAAATTTCTGATTCTATGGGCAGGACCAATTCCAAAGAAGATACATTTGCCAAGGAGGATGACATTTTCAGTGAACAAAACCATTCGACTTATAGAGAAGAGAATCTACGTAGATCTGCACGGCAAAAGCTGAAGGTTTCGTACAAAGAGAACAGGAGTGATGACAAGGACAATGACCTAATGCCTTCAAAAAGAGCTAAGGGGAGTGAATCACCACCAGTTACTGAAGAAGCTTGCAGGAAGGAAGctaaaaagaattatcaaaATGGTTCAGCTACTGATCTGAAAGATGATGAGAAAGAGATGAAAGAGGAACACAATCTTTTTTCTGAAGAGAGCTTACCCAATAGAAATGTGGAAACCGAGGAGATgagcagaaaagaaagagtggAAGGCACAAAGAAGGCAGATGAAGCTTCTGAGCATTATGCACCTGATCCAACCTTGAAAGCAACAGAAAATCCAAAGATTCTTGAGTGTCCTGATGGAGAGTTCAGTGACTTTGAGAAGcacaagaaagaagaatgtTTTGCTCCTGGGCAGATGTGGGCAATTTATGATGCAACAGAAGGCATGCCTAGATTCTACGctgtaataaaaaaagttctcTCTCCTGGGTTCAAGCTGGAAATAACATGGTTTGAACCGGATCCTGTTAACGAGGATGAAATTAAGTGGGTGGCTGAGGAATTACCAGCTGCTTGTGGGAGGTTTTTCCATGGAGCAACTGAAATCACAGAAGACCGTCCCATGTTCTCACATTTGATTTATTGTGAAACAACTGGTCGAGGTAAAAAAGCTCTTTATAAAGTATATCCTAGAAAGGGAGACTCTTGGGCTCTCTTTAGAAATTGGGATATTAAATGGCACACTGATGCAGAGTCTCATCGAAATTATGAATTTGAGTTTGTTGAAATCATGTCAGATTATGTTGAGGATAAGGGTGTATCTGTTGCATATTTGGCTAAGTTGAAAGGCTTTGTGAGTCTTTTCTCTCGAATTGTCAAGGAAGGTAATCACTCGTTCCTAATTCCATCACAGGAATTATTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACTGGCCAAGAAAGATTAGGTGTTCCTACAGGATCTTATGAACTTGATCCTGCATCTTTGCCTTTGAATATTGAAGAGATTGATGCTCCTGAAGATTTGGAAGTAAACATTAGTCCATCTGGTGGCGTGAATATGAGTTCTCCAGGTAGATTGAAACCCATGGTGGCATCTGATGGAGACGAATCTAATgtcagaagaagaaattttgaggAAGAGAATGGTGATGTTGAAGATCGTAGTGCTCCTTCAGCTCCAAACCAAGAAGCTATCGAAATTCCAGATCCTCAGTTCTATGATTTTGATGCCAATAGGACCCAGGATAAGTTTCAGATTGGTCAGATTTGGGCTTTTTATAGTGATGAGGATACCATGCCAAAATACTATGGCCTGATTAAGAAAATTGTGACTAGCCCAAATCTTAAGTTGTATGTTTCTTGGCTTGCTTCCTGCAATTTGCCTGAGAATGCTACCAGAtgggaaaaagacaaaaaaatgcCAATATCTTGTGGCAGGTTTAGAATTGACAAGAAACTTTCCGAAGTTTACAATGACACCCTTTCCATTTCACATCAGGTGCATGCTGACTCTGATGGTAGGAATAATGCATTTGATATCTTTCCTAGGAAAGGTGAAGTCTGGGCATTGTATAGGAACTGGACAGCTGAAATGAAACGAGTTGACTTGGTAAATTGGCATTATGACACAGTCGAAGTTCTTCAAGAAACCGATTTGTGGATTcaagttttggttttggagaTTGTTGGTGGTTTTAATTCTGTTTTTAGACCCCAATTGAACGGCAAAACAGCTTTTTCTTTGAGAATACGCAAGACACAGTTACTTAGGTTCTCCCATCAAATTCCTGCATTCAAACTGACAGAGGAACATGGCAATGGCAATCTGAAAGGCTTTTGGGAACTTGATCCGCTAGCAGTACCAATGCATTATTTTGGCTCCTCCTG 2918 0.3972 MDCNKEEAVRAKNIALMKMESRDFTGARKSALKAQQLYPDLENIAQILVVCDVHCSAEQKLFGNEMDWYGILQIEQTANDATIKKQYKKFALLLHPDKNKFAGAEAAFKLIGEASRVLTDRDKRAIHDMKRRASMNKPAMSHHPPQKVYTNLNAGMHNNVRNNFSNLYPQHPHPQYRPQGQPWPYNARPQHQQQSGNQEPNGIHTTFWTICPFCAVRYQYYTEVMNKSLRCQSCRMSFVAYDLNVQGMSPTTNGNSEKSNREPLKKKGSSPYTVSGEMNGKRRRKKATESSEISDSMGRTNSKEDTFAKEDDIFSEQNHSTYREENLRRSARQKLKVSYKENRSDDKDNDLMPSKRAKGSESPPVTEEACRKEAKKNYQNGSATDLKDDEKEMKEEHNLFSEESLPNRNVETEEMSRKERVEGTKKADEASEHYAPDPTLKATENPKILECPDGEFSDFEKHKKEECFAPGQMWAIYDATEGMPRFYAVIKKVLSPGFKLEITWFEPDPVNEDEIKWVAEELPAACGRFFHGATEITEDRPMFSHLIYCETTGRGKKALYKVYPRKGDSWALFRNWDIKWHTDAESHRNYEFEFVEIMSDYVEDKGVSVAYLAKLKGFVSLFSRIVKEGNHSFLIPSQELFRFSHRVPSFKMTGQERLGVPTGSYELDPASLPLNIEEIDAPEDLEVNISPSGGVNMSSPGRLKPMVASDGDESNVRRRNFEEENGDVEDRSAPSAPNQEAIEIPDPQFYDFDANRTQDKFQIGQIWAFYSDEDTMPKYYGLIKKIVTSPNLKLYVSWLASCNLPENATRWEKDKKMPISCGRFRIDKKLSEVYNDTLSISHQVHADSDGRNNAFDIFPRKGEVWALYRNWTAEMKRVDLVNWHYDTVEVLQETDLWIQVLVLEIVGGFNSVFRPQLNGKTAFSLRIRKTQLLRFSHQIPAFKLTEEHGNGNLKGFWELDPLAVPMHYFGSS 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01920 972 MobiDBLite consensus disorder prediction 382 435 - -
Bva05g01920 972 MobiDBLite consensus disorder prediction 691 744 - -
Bva05g01920 972 Pfam Domain of unknown function (DUF3444) 739 947 IPR024593 -
Bva05g01920 972 Pfam Domain of unknown function (DUF3444) 447 656 IPR024593 -
Bva05g01920 972 PANTHER - 256 970 - -
Bva05g01920 972 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 255 - -
Bva05g01920 972 PRINTS DnaJ domain signature 87 102 IPR001623 -
Bva05g01920 972 PRINTS DnaJ domain signature 69 87 IPR001623 -
Bva05g01920 972 PRINTS DnaJ domain signature 103 123 IPR001623 -
Bva05g01920 972 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Bva05g01920 972 SMART dnaj_3 66 123 IPR001623 -
Bva05g01920 972 MobiDBLite consensus disorder prediction 278 375 - -
Bva05g01920 972 CDD DnaJ 67 120 IPR001623 -
Bva05g01920 972 Pfam DnaJ domain 67 128 IPR001623 -
Bva05g01920 972 MobiDBLite consensus disorder prediction 185 200 - -
Bva05g01920 972 SUPERFAMILY Chaperone J-domain 63 134 IPR036869 -
Bva05g01920 972 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 256 970 - -
Bva05g01920 972 MobiDBLite consensus disorder prediction 168 200 - -
Bva05g01920 972 MobiDBLite consensus disorder prediction 247 445 - -
Bva05g01920 972 PANTHER - 1 255 - -
Bva05g01920 972 MobiDBLite consensus disorder prediction 711 730 - -
Bva05g01920 972 Gene3D DnaJ domain 64 177 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01920 Bva-Chr5 14810801 14815545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01920 19 243 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 28.947 3.30e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01920 - - gmx:100795200 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01920 05 14810801 14815545 Bva05g01920 05 14810801 14815545 ECH