Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01913 ATGGCTGTTGAATCATTGCTCACCAAGTTAACGGCGTTTATGACCTCAGATCATGCTTCAGTGGTCTCAATGAACCTATTTGTTGCACTACTTTGTGCTTGCATCATAATTGGTCATCTGCTGGAGGAGAATCGATGGATTAACGAATCCATCACTGCCCTTGTCATTGGTATCTGTACTGGGTTTTTTATACTGCTTACAACAGGAGGAAAAAGCTCTCGAATATTGGTATTCAGTGAagatcttttctttatttatcttctaCCACCGATCATTTTCAATGCAGGGTTTCAggtgaagaagaaacaattttttcgCAATTTTATGACGATCATACTCTTTGGTGCAGTTGGCACTTTGATATCATTTGGCATCATATCACTAGGTGCTATACACTTTTTCCAGAAATTGGATATTGGATCCCTCAAGATTGGAGATTATCTTGCACTTGGAGCAATATTTTCAGCAACAGATTCTGTTTGTACGTTGCAGGTGCTTAATCAGGATGAGACACCATTATTGTACAGCCTAGTGTTTGGGGAGGGTGTAGTAAATGATGCTACATCTGTGGTGCTGTTGAAAGCAATTCAAAACTTCGACCTGGCACACATCGACTTGACCACTGCATTAGAGTTAATAGGAAactttttatacttatttatcGCAAGTACTATGCTGGGAGTCTTAgCTGGATTGCTTAGCGCATACATTATTAAGAAACTTTATTTTGGAAGGCATTCTACTGACCGTGAGGTTGCTCTCATGATACTTATGGCTTACCTTTCATATATGCTAGCTGAACTATTTGCTTTGAGTGCCATTCTCACCGTGTTCTTCTGCGGCATTGTCATGTCTCACTATACATGGCACAATGTGACTGAAAGTTCAAGGGTGACAACAAAGCATGCCTTTGCCACTTTATCATTAATTGCTGAGATCTTTATCTTCCTTTACGTTGGGATGGATGCACTGGATATAGAGAAATGGAGATTTGTATATCAAAGCCCTGGAAAGTCAATTGGAGTCAGTTCAACGCTGTTAGCACTTATTCTAGTTGGAAGAGCAGCCTTTGTTTTCCCCCTGTCATTGCTAGCCAACTTGCCAAAGAAATCTTCATCTGATCAGAGAATTGAGTTCAAGCAACAAGTAACAATTTGGTGGGCTGGTCTTATGCGTGGAGCTGTTTCTATGGCACTCGCTTATAATCAGTTCACCAGGTTGGGCCATACAAAGTTGCGTGAGAATGCCATCATGATCACTAGCACTATTACTGTCGTACTCTTCAGCACTGTGGTGTTTGGGTTGATGACGAAGCCACTTGTGAGGTTATTGCTTCCTTCATCAAAACACGTTATCAGCATACCGTCCCCACCTTCTACTCCCAAATCATTCCTTGTGCCACTTCTCGGCAATGGCAATGGCAATGGCCATGATTCAGGGTCCAATGGTGGAACCCAGGATGCAGGTCGCCCCAGCGGCTTACGAATGCTCTTAAGCATCCCCTCTTGTGACGTCCATCATTATTGGCGAAAATTTGATGATGCTGTCATGCGACCTGTCTTTGGTGGGCGAGGTTTTGTACCCTTTGTTCCAGGCTCGCCGCTTGAACAGAGTGTTCATCAATGGAGTTA 1631 0.4145 MAVESLLTKLTAFMTSDHASVVSMNLFVALLCACIIIGHLLEENRWINESITALVIGICTGFFILLTTGGKSSRILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIILFGAVGTLISFGIISLGAIHFFQKLDIGSLKIGDYLALGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLLKAIQNFDLAHIDLTTALELIGNFLYLFIASTMLGVLAGLLSAYIIKKLYFGRHSTDREVALMILMAYLSYMLAELFALSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSLIAEIFIFLYVGMDALDIEKWRFVYQSPGKSIGVSSTLLALILVGRAAFVFPLSLLANLPKKSSSDQRIEFKQQVTIWWAGLMRGAVSMALAYNQFTRLGHTKLRENAIMITSTITVVLFSTVVFGLMTKPLVRLLLPSSKHVISIPSPPSTPKSFLVPLLGNGNGNGHDSGSNGGTQDAGRPSGLRMLLSIPSCDVHHYWRKFDDAVMRPVFGGRGFVPFVPGSPLEQSVHQWS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01913 543 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva05g01913 543 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva05g01913 543 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva05g01913 543 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva05g01913 543 PANTHER SODIUM/HYDROGEN EXCHANGER 3 7 542 - -
Bva05g01913 543 PANTHER SODIUM/HYDROGEN EXCHANGER 7 542 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bva05g01913 543 Pfam Sodium/hydrogen exchanger family 27 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva05g01913 543 Gene3D - 143 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01913 Bva-Chr5 14755795 14760349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01913 5 543 Antiporters AT3G05030 73.297 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01913 - - ccaj:109808409 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01913 05 14755795 14760349 Bva05g01913 05 14755795 14760349 ECH