Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01906 ATGGGGTGTGTGTTTGGGAGACAGGCGTCCGCGAAGTCGGGTGCGGCGGCGGAGACGGTGGTAGAGAaggagagagggagagagaaagtgaaagCTCCAAAAGTAGAAGTGAGCGAGGCTCAAAATGGTGGAAATCAGAAGGAGGGTGGAGAGGAGAAGACCACGCGGCAAAAGGGGGAACGGCGGCGATCATCAAAGCCTAATCCGAGGTTGAGCAATCCCCCTAACCATGTTCATGGTGAGCAAGTAGCTGCTGGGTGGCCGTCTTGGCTCTCTAAGGTTGCTGGGGAAGCTATAAATGGATTGACTCCCAGAAGGGCGGACACTTTTGAGAAGCTCGATAAGATTGGGCAAGGTACATATAGTAATGTTTACAAAGCCAGGGATACCTTAACGGGGAAAATTGTTGCCCTGAAGAAGGTTCGTTTTGACAACTTGGAGCCTGAAAGTGTGAAATTCATGGCCAGAGAGATTCTTATTCTACGTCGCCTGGATCATCCAAATGTTATCAAATTGGAAGGTTTAGTGACTTCTAGAATGTCATGTAGTTTATATCTTGTGCTTCAATACATGGAGCATGATTTGGCTGGACTTGCCACAAGCCCGACAATTAAATTCACAGAGCCTCAGGTTAAATGTTATATGCATCAACTATTTTCCGGGCTGGAACACTGTCATAACCGTCATGTGCTGCATCGTGATATAAAGGGTTCAAACCTTCTAATTGACAATGAAGGAACCCTTAAGATAGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTAATCACAAGCATCCTATGACTAGTAGGGTGGTGACTTTATGGTATCGACCTCCAGAACTACTCCTTGGGGCCACTGACTATGGTGTAGGTGTGGATCTCTGGAGTGCTGGCTGCATTCTAGCTGAACTGTTGGCTGGAAAGCCTATTATGCCTGGTCGCACAGAGGTTGAACAGCTACATAAGATATTTAAGCTATGTGGTTCTCCTTCAGAAGAATATTGGAAAAAGTCAAAGTTGCCACATGCTACCATTTTTAAGCCTCAACAATCATACAAGCGGTGCATACAAGAGACATTCAAAGATTTTCCAGCTTCATCGTTGCCACTAATTGAGACCCTTCTTGCAATCGATCCAGCTGAACGTCAAACTGCTACAGCTGCATTGCAAAGTGAATTCTTTACCACAAAACCTTATGCTTGTGAGCCTTCTAGCCTTCCAAAGTATCCTCCCAGCAAGGAGATGGATGCAAAGCAACGGGATGAAGAAGCTAGAAGATTGAGAGCTGCTGGGAAAGCTAATGCCGATGGTGTCAAAAAATCTCGGCCACGTGACCGAGTTGGGAGGGGAATTCCTGCTCCAGAAGCCAATGCTGAGCTTCAAGCAAATATTGATAGGCGGCGACTGATAACACATGCAAATGCCAAGAGCAAGAGTGAGAAGTTTCCTCCTCCACACCAAGATGGAACCCTTGGCTATCCTTTGGGTTCTTCCCATCACATGGATCCAGTTTTTGATCCTCCAGATGTTCCATTCAGTTCCACAAACTTTTCATATCCTAAAGCAAATATCCAAACTTGGTCTGGCCCCTTGGTTGATTCTGCTGCCGTGGGTGCccaaaggagaaagaagaacaTGGCTGGTGATGGGCATACACAATCAAAGTCATCAAAGGACTCcaaaagata 1688 0.4473 MGCVFGRQASAKSGAAAETVVEKERGREKVKAPKVEVSEAQNGGNQKEGGEEKTTRQKGERRRSSKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVLQYMEHDLAGLATSPTIKFTEPQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNEGTLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIQETFKDFPASSLPLIETLLAIDPAERQTATAALQSEFFTTKPYACEPSSLPKYPPSKEMDAKQRDEEARRLRAAGKANADGVKKSRPRDRVGRGIPAPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGTLGYPLGSSHHMDPVFDPPDVPFSSTNFSYPKANIQTWSGPLVDSAAVGAQRRKKNMAGDGHTQSKSSKDSKR 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01906 562 Pfam Protein kinase domain 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01906 562 Gene3D Transferase(Phosphotransferase) domain 1 193 433 - -
Bva05g01906 562 Gene3D Phosphorylase Kinase; domain 1 98 192 - -
Bva05g01906 562 SUPERFAMILY Protein kinase-like (PK-like) 105 399 IPR011009 -
Bva05g01906 562 SMART serkin_6 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01906 562 PANTHER CELL DIVISION PROTEIN KINASE 46 542 - -
Bva05g01906 562 MobiDBLite consensus disorder prediction 461 483 - -
Bva05g01906 562 ProSiteProfiles Protein kinase domain profile. 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01906 562 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Bva05g01906 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Bva05g01906 562 MobiDBLite consensus disorder prediction 544 562 - -
Bva05g01906 562 MobiDBLite consensus disorder prediction 533 562 - -
Bva05g01906 562 MobiDBLite consensus disorder prediction 1 81 - -
Bva05g01906 562 MobiDBLite consensus disorder prediction 404 515 - -
Bva05g01906 562 MobiDBLite consensus disorder prediction 18 35 - -
Bva05g01906 562 MobiDBLite consensus disorder prediction 49 67 - -
Bva05g01906 562 MobiDBLite consensus disorder prediction 413 449 - -
Bva05g01906 562 CDD STKc_CDK9_like 110 394 - -
Bva05g01906 562 PANTHER CYCLIN-DEPENDENT KINASE 46 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01906 Bva-Chr5 14723456 14728439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01906 105 432 Core Cell Cycle Gene Families AT5G10270 52.035 3.33e-119 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva05g01906 Pkinase 3.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01906 K08819 - mnt:21391828 954.896