Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01889 ATGGGTGGGTGCTTTCCTTGTTTTGGATCATCCAACAAGGGGGAGAGTGGGGTGAAGGAAGTTGTCAAGAAGGAATCATTTAAAGAAGGCTCAGTTGCTGTGTCTCACCAGTCCAGCAGAGTTAGTTCTgATAAATCAAAATCACGCAATGGCACTGATCCTAAGAAGGAACCACCAATTCCGAAAGATGGACCAACAGCCCACATTGCTGCACAAACATTTACATTCAGAGAACTTGCAGCTGCCACAAAGAATTTTAGGCCAGAATGTTTGTTGGGTGAAGGAGGATTTGGCCGTGTATATAAAGGTCGCCTTGAGATCACTGGACAGGTAGTTGCTGTAAAACAGCTTGACCGCAATGGCCTTCAAGGAAATCGAGAATTTCTGGTGGAGGTTCTCATGCTCAGCCTCTTACATCACCCAAATCTTGTTAATTTAATCGGTTATTGTGCAGATGGTGATCAACGACTGcttgtttatgaatttatgCCATTGGGTTCTTTGGAGGATCATTTACATGATCTTCCTCCTGACAAGGAACCCTTGGACTGGAACACAAGGATGAAAATAGCAGCAGGTGCAGCTAAGGGATTGGAATATTTGCATGACAAAGCAAACCCCCCAGTGATATATAGAGACTTGAAATCATCCAACATTCTTCTAGATGAGGGTTTTCATCCCAAGTTATCAGATTTTGGCCTTGCAAAACTGGGTCCTGTCGGTGATAAGACTCATGTATCAACACGAGTTATGGGAACTTACGGTTATTGTGCCCCGGAATATGCTATGACTGGCCAACTGACCCTGAAGTCTGATGTGTACAGTTTTGGAGTTGTCTTCTTGGAACTTATCACTGGGCGCAAAGCAATAGATAATACACGTGCTCCTGGAGAGAACAATCTAGTGGCATGGGCACGACCTCTTTTCAAAGACCGTCGGAAGTTCCCCATAATGGCTGATCCTTTGCTTCAAGGCCGTTATCCAATGCGAGGACTCTACCAAGCACTCGCTGTTGCAGCAATGTGCTTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGGGATGTTGTGACTGCTCTCACATACCTCGCCTCACAGACATACGACCCAAATGCACCCAGTCAGAGCAACAGAGTTGGTTCATCAACTCCCAGGAGCAGGGATGACAGAAGAAACATGGGAGATAGTCTGGATAGCCCTGATCGTGGACGACTTGGCTCCCCTTCCACTCATAGAAATTCACCCGATTACAGGAAGAGAGATGGTAGAGACCTAAATGCTGGGACAGACTTAAGCACGAGTGAAACTGGTGGGGGGTCAGGGAGAAGATGGGGATATGATGATGTAGAAAGGCAAGAATCACAGAGAGATAGCCCTGGAAGAGCAACTCCAAGGAACCGCGACCTAGACAGAGAAAGGGCAGTTGCAGAAGCCAAAGTATGGGGTGAGAATTGGAGAGATAAAAAGCGAGCAAACGCGATGGGTAGCTTCGATGCTACAAATGAGTA 1508 0.4609 MGGCFPCFGSSNKGESGVKEVVKKESFKEGSVAVSHQSSRVSSDKSKSRNGTDPKKEPPIPKDGPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLEITGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAPGENNLVAWARPLFKDRRKFPIMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAPSQSNRVGSSTPRSRDDRRNMGDSLDSPDRGRLGSPSTHRNSPDYRKRDGRDLNAGTDLSTSETGGGSGRRWGYDDVERQESQRDSPGRATPRNRDLDRERAVAEAKVWGENWRDKKRANAMGSFDATNE 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01889 502 PANTHER OS07G0668900 PROTEIN 1 496 - -
Bva05g01889 502 MobiDBLite consensus disorder prediction 383 398 - -
Bva05g01889 502 MobiDBLite consensus disorder prediction 367 382 - -
Bva05g01889 502 CDD STKc_IRAK 92 361 - -
Bva05g01889 502 Pfam Protein kinase domain 91 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01889 502 MobiDBLite consensus disorder prediction 367 473 - -
Bva05g01889 502 Gene3D Phosphorylase Kinase; domain 1 61 162 - -
Bva05g01889 502 MobiDBLite consensus disorder prediction 26 66 - -
Bva05g01889 502 SUPERFAMILY Protein kinase-like (PK-like) 68 360 IPR011009 -
Bva05g01889 502 MobiDBLite consensus disorder prediction 42 62 - -
Bva05g01889 502 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 496 - -
Bva05g01889 502 Gene3D Transferase(Phosphotransferase) domain 1 163 380 - -
Bva05g01889 502 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01889 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Bva05g01889 502 MobiDBLite consensus disorder prediction 444 473 - -
Bva05g01889 502 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01889 502 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01889 Bva-Chr5 14644253 14650886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01889 36 404 Glycoside Hydrolase AT3G07070 64.267 1.54e-169 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bva05g01889 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01889 - - gmx:100814575 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01889 05 14644253 14650886 Bva05g01889 05 14644253 14650886 ECH