Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01885 ATGGAATCGTCTTGTCGTCGGAGAAAGACATGGCGAAGAATGGAGCAGGAGAAGGTGGTGAGGAAGGTAATTTGGCCTGCGATTCGGGGGCGTTCCTGTCCAATATGTTTCAGGAACCTCGAAGTTCATTACAGAGCAGCTGCGGTTCTCACTGCGTGTAGGCACGCTTACTGCATCGAATGCATTCGCAAATGGAGTAAACTGAGAAGAAAATGCCCCCTTTGTAATGCGGAGTTCAATTCCTGGTTCTGCAAGCTCAGCCTTTCCTCTAGAGAGTTCCAGAAGGAGGTGTTGCCCTTCCATGATTTGCGTACTAATTCCAATGAGGAAATCGGTACAGAACAGATAGATTCTCGAAGAATTCTTGCAAGAACAAGAGCTGCATTAAACGATAGACGAACAAGGGCACTGCCAAGGAGAAGATCATTTGGGCGCCCTGGACTTGTGAGTCCAGAGATCATGGCTCATAGGAAACTTGAATGGCGTGCCAGCATATACAGCCGAGGGATCCAAGCAGTTCCTTCAACCTCAAGCTGTCCTGAGCAGGATAGATTGAGAAATAatgctgaaaaagaaaaattattagaaaggATTAAGCCATGGATACGAAGGGAGCTGCAAACTATCCTGAGTGATCCAGATCCATCTGTCATTGTCCATGTGGCAACCTCACAGTACATTGCCTGGCTAGAAGAGAAAGCCAAATCGCCATCACAGCAACTTGACGTTCAAGACAGCTTCATGTCGCCATTGTGTCGTTTCCTGCATGATAAAACCAGTATCTTTTGGCACGAATTAAGATGTTTTGCAGAGTCTTCTTACAACATGGAAACCTATGATGCAGTAGTTGAATATGAACAGCTGCAGTG 869 0.4511 MESSCRRRKTWRRMEQEKVVRKVIWPAIRGRSCPICFRNLEVHYRAAAVLTACRHAYCIECIRKWSKLRRKCPLCNAEFNSWFCKLSLSSREFQKEVLPFHDLRTNSNEEIGTEQIDSRRILARTRAALNDRRTRALPRRRSFGRPGLVSPEIMAHRKLEWRASIYSRGIQAVPSTSSCPEQDRLRNNAEKEKLLERIKPWIRRELQTILSDPDPSVIVHVATSQYIAWLEEKAKSPSQQLDVQDSFMSPLCRFLHDKTSIFWHELRCFAESSYNMETYDAVVEYEQLQ 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01885 289 ProSitePatterns Zinc finger RING-type signature. 53 62 IPR017907 -
Bva05g01885 289 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 26 286 - -
Bva05g01885 289 SUPERFAMILY RING/U-box 25 82 - -
Bva05g01885 289 ProSiteProfiles Zinc finger RING-type profile. 33 76 IPR001841 -
Bva05g01885 289 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 146 IPR013083 -
Bva05g01885 289 SMART ring_2 33 75 IPR001841 -
Bva05g01885 289 PANTHER TOPOISOMERASE I-BINDING, ARGININE/SERINE-RICH A-RELATED 26 286 - -
Bva05g01885 289 Pfam Ring finger domain 32 76 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01885 18 266 C3H Transcription Factor Family AT2G39100 47.222 7.84e-72 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01885 - - jre:109005961 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01885 05 14594713 14597420 Bva05g01885 05 14594713 14597420 ECH