Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01877 ATGGCCCCATctaaaaaatccaaaagtgTGAATAAGAGGCTTTCAAGTGCTCGTGAAGCAGCATCTAGTAAAGACAAATTTGCAGATAATGCTAACAAGAGTAGGCAGCAGGCAAGTCCTGGCTTTCAGAAAaagagaaaattggCTGACATGCTAGGGCCTCAGTGGAGTAAAGAGGAGCTTGAGCGTTTCTATCATGCTTATCGGAAGTATGGAAAGGACTGGAAGAAGGTTGCCGCTACAGTGCGTAATAGATCTTTGGAAATGGTAGAAGCTCTGTACACTATGAATAGGGCATACCTGTCTCTTCCTGAGGGCACTGCTTCTGTGGTTGGGTTGGTAGCAATGATGACAGACCATTATAGTCTACTGGGAGGAAGTGATAGTGGACAAGAAAGCAATGAAGATACAGAAGCATCTAGAAAGCCTCAAAAACGCTTGCGTGGAAAGTGTCTGTATGACAACTATAAAGCACTTGATGAGCACTGTTCAGACCATTCTCAGTCTCAGTCTGTTGCATCAAGTCGTGGTTGCCTTTCTttgttgaagaagaagcacTCTGgAATTAGGCCTCATGCTGTTCGAAAAAGGACTCCTCGTATCCctatttcatattcttttggtAAAGATAATGGGGAGAAGTATTTTTCATCTGCTAGGCAAGGTTTCAAACAGCTGGTTGATACTAACGATGTTGCTCATAAGATTGCATTAGCATTGACAGAGGCTTCGCAAAAAGGTGACCCTGCCAAAATATCTGGAACACCAAACAAGAAAACTAAAGGCACTATGCCATCACTGGGTCAGAATTTTAGAAGGAAGCATGCAGAATCAGAACTAGCTAGAGCCAAGTTCTGTGGTTCTGACTTGGGAAGTGGTAGTTCTGAATTGAGTTTAGGAAGCACAGAAGATGATAATGGAgattattctaaaaaaattattcattggAGCAGTAGAGAAGGTGCTGGAAGAGTAAAGAATCAAGAGAAAGGATTTAAATACCAGCCAAAGAAGTTAGAACTTGAAGAAAATGTAAACAAGCATTTGGATGACATAAAGGAAGCCTCCAGTGGGACAGATGATGGTAAAAGATTGGGATTTGTCAAGTCTAATATTGAGACTGATATTGCAGATGAAAAGATTACAAGGCCTGATTATAAGGGTCCCAGGAAGAGAAGTAAAAAAGTAACGTTAGAGAAAGATGAAGGTTCTGCTTTTGATGCTTTGAAGGCTCTCGCTGATCTGTCACTGATGATGCCAGAAACAAACCCTGATGCTGAGTCATCTGCATGGGTGAAGGAAGAAAACCACGATGTTGTTGATGAGTCTAGAATGGAAACACATAATACATTTCCAAGGGTTGAAAGCACTGCTTCGAGCAAATTGAGCAAAGCTTGTTCTGACAATGGAGCTGCTGTTCCTGACACAGAGGGTCCTCACCTGCTTAATGCTggaattagaaaaagaaaacagaagtcTGTACCATTGAAAGAAGATGAAGCTCATGCTGGTTCTCGTTTAAGTGTTTCCCAGAAAAACAAGGCTACTGATGAGGTGAAGAAATCTGCAGTTAAGGGTAAGCGCTCCTCTGTTGGTAAAGCACATTCAAGACAATTAAAGATGGTGAAACCCCCAGGGAACATGTCTTCAAATACTGACAACAACCGGGATGGCTCATCATTGTCACCCAGAAAGGGTTCACATACAAACCATGTTAATATAGCAAACAAAGGAAGGCATAGACGAAAGatggaaaaaccaaaatcaatGACAGAGAGGGATTCAAAAGTGTCTGGAAATATTTTTAGCAGTCAACATAATAAACTGATTTCTTCACTTCAGGATGGTGCTACAAGTCACAAGGGAAAGCTTATTAATTGTCTATCTTTATGTCAAACACGGCGATGGTGCACCTTCGAATGGTTTTACAGTGCTATAGATTACCCGTGGTTTGCAAAAAGGGAGTTCATGGAGTACTTGGACCATGTTGGGTTGGGTCATGTTCCAAGATTGACTCGTATTGAGTGGGGAGTCATTAGAAGTTCTCTTGGTAAACCACGAAGATTCTCTGagcaatttttgaaagaagaaaaaagtaaactttATCAATACCGGGAATCTGTGAGAACACATTATGCTGAACTTCTTGCTGGCACCAGGGATGGTCTTCCAACTGACTTGGCTCTGCCTTTAGTTGTTGGACAGCGTGTTATTGCTATCCATCCAATTACAAGAGAGATTCATGATGGAAGCATACTGACCGTTGACCATTCTAGATGTCGGGTTCAGTTTGACCAACCTGAACTTGGGGTTGAATTTGTCATGGATATTGACTGCATGCCTCTAAATCCATTGGAAAATATGCCTGCATCTCTGATAAGGCACAATGTCACTTCTGATAAACTAAATGATGACTTTATTGAGCTCAAGCTCAATGGGAAGCTGAAACAAGGAAAGATTGAAGAACACGTGATTATTTCCCCCAATGAGAATTCAGAAAACATTGAAGGTCTCTATATATCCCCCCCTATTCATGGCATCAGTAGTTTATCAAAGCAGGATGTTTCTTCAAGCACCAAATCACAACTAGAGATTGGCAATGCCCAACTAGCATCAAGTTCTCTACCTTACCTTCTTGCACACGCCCAAACAAAAGAAGCTGATGTACTAGCTGTTTCTGAGTTGATTCGTGTTCTTGAAAAGAAGGAACTGGTGTTGTCTGAACTTAAGCACATGAATGCTGAGGTAGTTGAAAACCAGAAAGATGGGGGCAACTCTTTGAAGGATTCAGAGCCTTTTAGAAGGCATTATGCTGCAGTACTGTTGCACTTACATGAAGTTAACGAACAGgtCTCTTCTGCCTTGCTTTGCTTGAGGCAACGCAACAAATATCAGGGGAGCTCTTCAGTTTTGTCAGTGATGAAGCCCACAGCTAATTCTGAAGATCCTGGTGGCCAGGCTAGCTCTTCCAATTGTTCAGCTTGTTACAACCAAGAATCTCTGTCTCATATAGCTGAAATTGTTGAAAGTTCCAGAACAAAAGCCCGAAAACTAGTTGAGGCAGCTGTGCAGGCAATGTCATATTTTAGGAAGACAGAAAATACGGGAGAAAGAATTGAGGaagcaataaattttataaatagtcGGCTTTCAGTGGAAGACTCTGCTGCTCCAGCTACACGTTTTGAGCCAGCAGATTCTGTTCATGTCTCACTGGCTTCTCAGGATCAGTTAACTGTCATTACATCAAACCCGTTTGCAAGTAATCATGGACAAGATCCCGAACTAAACAGTTCCTCTGACCaaaatgaagtgaaaattCCGTCAGATCTTATATCTCATTGTCTAGCAACATTGTTCATGATTCAGAAGTGTACGGAACGACAATTTCCCCCAGCTGATGTTGCTCAAATTCTAGATTCTGCTGTTACCAGTTTGCAGCCATTTTCTTCAAAGAATCTTCCAATATATGCAGAGATACAGAAATGTATGGGCATCCTAAGAAATCAGATATTGGCACTCGTACCTACCTA 3533 0.3974 MAPSKKSKSVNKRLSSAREAASSKDKFADNANKSRQQASPGFQKKRKLADMLGPQWSKEELERFYHAYRKYGKDWKKVAATVRNRSLEMVEALYTMNRAYLSLPEGTASVVGLVAMMTDHYSLLGGSDSGQESNEDTEASRKPQKRLRGKCLYDNYKALDEHCSDHSQSQSVASSRGCLSLLKKKHSGIRPHAVRKRTPRIPISYSFGKDNGEKYFSSARQGFKQLVDTNDVAHKIALALTEASQKGDPAKISGTPNKKTKGTMPSLGQNFRRKHAESELARAKFCGSDLGSGSSELSLGSTEDDNGDYSKKIIHWSSREGAGRVKNQEKGFKYQPKKLELEENVNKHLDDIKEASSGTDDGKRLGFVKSNIETDIADEKITRPDYKGPRKRSKKVTLEKDEGSAFDALKALADLSLMMPETNPDAESSAWVKEENHDVVDESRMETHNTFPRVESTASSKLSKACSDNGAAVPDTEGPHLLNAGIRKRKQKSVPLKEDEAHAGSRLSVSQKNKATDEVKKSAVKGKRSSVGKAHSRQLKMVKPPGNMSSNTDNNRDGSSLSPRKGSHTNHVNIANKGRHRRKMEKPKSMTERDSKVSGNIFSSQHNKLISSLQDGATSHKGKLINCLSLCQTRRWCTFEWFYSAIDYPWFAKREFMEYLDHVGLGHVPRLTRIEWGVIRSSLGKPRRFSEQFLKEEKSKLYQYRESVRTHYAELLAGTRDGLPTDLALPLVVGQRVIAIHPITREIHDGSILTVDHSRCRVQFDQPELGVEFVMDIDCMPLNPLENMPASLIRHNVTSDKLNDDFIELKLNGKLKQGKIEEHVIISPNENSENIEGLYISPPIHGISSLSKQDVSSSTKSQLEIGNAQLASSSLPYLLAHAQTKEADVLAVSELIRVLEKKELVLSELKHMNAEVVENQKDGGNSLKDSEPFRRHYAAVLLHLHEVNEQVSSALLCLRQRNKYQGSSSVLSVMKPTANSEDPGGQASSSNCSACYNQESLSHIAEIVESSRTKARKLVEAAVQAMSYFRKTENTGERIEEAINFINSRLSVEDSAAPATRFEPADSVHVSLASQDQLTVITSNPFASNHGQDPELNSSSDQNEVKIPSDLISHCLATLFMIQKCTERQFPPADVAQILDSAVTSLQPFSSKNLPIYAEIQKCMGILRNQILALVPT 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01877 1177 MobiDBLite consensus disorder prediction 450 466 - -
Bva05g01877 1177 MobiDBLite consensus disorder prediction 491 505 - -
Bva05g01877 1177 PANTHER LIN-9 1 1177 IPR010561 GO:0006351|GO:0017053
Bva05g01877 1177 MobiDBLite consensus disorder prediction 1 47 - -
Bva05g01877 1177 SMART sant 52 100 IPR001005 -
Bva05g01877 1177 MobiDBLite consensus disorder prediction 245 268 - -
Bva05g01877 1177 Pfam Myb-like DNA-binding domain 55 90 IPR001005 -
Bva05g01877 1177 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 1177 IPR028306 -
Bva05g01877 1177 CDD SANT 56 90 IPR001005 -
Bva05g01877 1177 MobiDBLite consensus disorder prediction 125 145 - -
Bva05g01877 1177 MobiDBLite consensus disorder prediction 543 573 - -
Bva05g01877 1177 ProSiteProfiles SANT domain profile. 51 88 IPR017884 -
Bva05g01877 1177 SMART DIRP_2 642 743 IPR033471 -
Bva05g01877 1177 MobiDBLite consensus disorder prediction 440 601 - -
Bva05g01877 1177 MobiDBLite consensus disorder prediction 248 267 - -
Bva05g01877 1177 SUPERFAMILY Homeodomain-like 52 99 IPR009057 -
Bva05g01877 1177 Gene3D - 2 108 - -
Bva05g01877 1177 MobiDBLite consensus disorder prediction 1 17 - -
Bva05g01877 1177 Pfam DIRP 641 742 IPR033471 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01877 Bva-Chr5 14550676 14563701 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva05g01877 DIRP 3.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01877 - - gmx:100811517 1625.53