Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01875 ATGCTTCTATCCGATCCGGTGAAGACCATGTCGCCCAAGGTAGAATTTTTCCAGTCTAAAGGTGCTTCAAGCTCTGATGTTGCCGCCATCTTGAAGGTGAGCCCCTGGATCTTCCATAGAAGCTTAAAGAATTGCATAATTCCTTATTATGATTTTCTCAAAGGATATCACCATTACATCTATAAAACGTTGTCCCAACATGATTCGTA 209 0.4115 MLLSDPVKTMSPKVEFFQSKGASSSDVAAILKVSPWIFHRSLKNCIIPYYDFLKGYHHYIYKTLSQHDS 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01875 69 PANTHER OS04G0637500 PROTEIN 1 58 - -
Bva05g01875 69 PANTHER CGI-12 PROTEIN-RELATED 1 58 IPR003690 GO:0003690|GO:0006355
Bva05g01875 69 Gene3D Transcription termination factor 3, mitochondrial 1 65 IPR038538 -
Bva05g01875 69 Pfam mTERF 2 56 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01875 Bva-Chr5 14549025 14549931 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva05g01875 mTERF 4.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01875 K15032 - qsu:112012360 64.3142