Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01865 ATGAGGAGCAAAGATTGGACATACAAAAGAGGCATCAAGGAACAAGATCGGCCGTTGCCAATAGCCAATGTTGGTCGGATCATGAAGCAGATTCTGCCGCAGAACGCGAAGATCTCGAAGGAAGCAAAGGAGACAATGCAGGAATGTGTTTCAGAGTTCATAAGCTTCGTGACCAGCGAGGCTTCGCAGAAATGCGGGAAAGAGAGGAGGAAGACTGTGAATGGAGATGACATCTGCTGGGCTCTGGGGACACTTGGTTTCGACGACTACGCCGAGCCGATGAGGAAGTAtctgcatatata 302 0.4834 MRSKDWTYKRGIKEQDRPLPIANVGRIMKQILPQNAKISKEAKETMQECVSEFISFVTSEASQKCGKERRKTVNGDDICWALGTLGFDDYAEPMRKYLHI 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01865 100 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 19 82 IPR003958 -
Bva05g01865 100 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 11 99 - -
Bva05g01865 100 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 11 99 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bva05g01865 100 PRINTS CCAAT-binding transcription factor subunit A signature 84 100 - -
Bva05g01865 100 PRINTS CCAAT-binding transcription factor subunit A signature 65 83 - -
Bva05g01865 100 PRINTS CCAAT-binding transcription factor subunit A signature 46 64 - -
Bva05g01865 100 Gene3D Histone, subunit A 8 100 IPR009072 GO:0046982
Bva05g01865 100 SUPERFAMILY Histone-fold 15 99 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01865 Bva-Chr5 14504873 14506205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01865 12 99 CCAAT-HAP3 Transcription Factor Family AT2G47810 81.818 1.51e-51 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva05g01865 CBFD_NFYB_HMF 9.3e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01865 K08065 - mus:103985260 167.933