Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01855 ATGCTTAGTCCTGAAGGAGAACTAAACATAAGTTTTGGCTATAAATGCAATAGTGGAAGAGATGTTCCTTGTAGGGTAACCAATGGCTTTGAAATCCTACCTGAATTCCACAGGACGAGTAGTTTTTCTTGCTTGTCTGGTGCAGCCTTAAGTGCCAATGCAACATTAGCAAACACAAATATCTGCAATGGGGTGATAGGAGAAGAAATTCTTCCCAATTGGGACTCTCCTAACTCATTTCGTAAGATACCCTCTTCGCCAAGTCTTTCAAGGTTGGATATATTGTCATCTTCTCTCCAGAGTAGCTTGTCAAACTTAAGCTGCAGTCCATCTACTCCAAGTGAGATGCTTGAATATGATTCTTGTACTTTAAAATCCATGAGTGCTCCTTCCAGAAACGAAGGCTTTCTTAATGCTGTGGAAGTGCAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGCTCTGAAGAAAATGGATGGCTATTTTGTGCAATTTATGATGGCTTTAATGGGAGGGATGCTGCTGACTTTCTAGCTGGTACCTTATATGACACCATCATATCTTgttctaataattttgattgggAATTGGAGACAGATCCCATTCAATCTTCCAACAACATTGGTTGGGACAGATCCTTCCAAAATAAGTTGAATGATAGAGAAGAAAGATCTCTATCAAGATTTGGGGGAAATAACAATTCTTATAATGACTGTTTTGCCGGGGGTAGTCCATCCACTAAGGTAGCAGCAtcatataaatcatttttacaAGGAGTTCTTGATAGCCTCCAACGCGCTCTTAACCAAGTTGAGAATGAATTCCTATACATGGTCGAGCAGGAAATGGAGGAGCGCCTGGATTTAGTGTCTATTGGTTCTTGTGTTTTACTTGTACTACTTCATGGGAATTACTTGTATACACTTAATCTTGGTGACAGTAGAGCGGTATTGGCAACATCCAGTACAGGTGATGGAAATGAGAGACTCAAAGCTATTCAGCTCACAGAGAGTCATACTGTTGAAAATGAAGCCGAAAGAGCTCGACTTCTGGCTGAACACCCTGATGATCCTATGACCATTGTAGCAGGAAAagtgaaaggaaaattgaaggTTACTCGTGCATTTGGAGTTGGTTACTTGAAAAAGAAAAATCTGAATGATGCATTGATGGGAATCCTTCGAGTTCAAGATCTTAAAAGCCCTCCATATATTTCCACTGAACCATCACTGAATGTGCATAAGATCTCGAATTCGGATCAATTTGTAATAGAAGCAAGTGATGGTTTATTTGACTTCTTTAGCAATGATGAGGCAGTGAAGCTGGTAGAGTCTTACATCTTGAGCAATCCTTCTGGTGATCCTGCCAAGTTTCTGATTGGGAAGCTTGTAGCCAGAGCAGCCAATTCTGCAGGTTTCAGCACAGAAGAGTTGATGAACATTCCTGCTGGGAGGAGGAGGAGTTATCATGATGATGTTACTGTGATTGTGATCATTCTGGGGATGAATCAGCGAACTTCAAAGGCATCAACTTGcatatg 1553 0.3973 MLSPEGELNISFGYKCNSGRDVPCRVTNGFEILPEFHRTSSFSCLSGAALSANATLANTNICNGVIGEEILPNWDSPNSFRKIPSSPSLSRLDILSSSLQSSLSNLSCSPSTPSEMLEYDSCTLKSMSAPSRNEGFLNAVEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISCSNNFDWELETDPIQSSNNIGWDRSFQNKLNDREERSLSRFGGNNNSYNDCFAGGSPSTKVAASYKSFLQGVLDSLQRALNQVENEFLYMVEQEMEERLDLVSIGSCVLLVLLHGNYLYTLNLGDSRAVLATSSTGDGNERLKAIQLTESHTVENEAERARLLAEHPDDPMTIVAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVQDLKSPPYISTEPSLNVHKISNSDQFVIEASDGLFDFFSNDEAVKLVESYILSNPSGDPAKFLIGKLVARAANSAGFSTEELMNIPAGRRRSYHDDVTVIVIILGMNQRTSKASTCI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01855 517 Coils Coil 258 278 - -
Bva05g01855 517 SUPERFAMILY PP2C-like 149 505 IPR036457 -
Bva05g01855 517 Gene3D - 107 513 IPR036457 -
Bva05g01855 517 SMART PP2C_4 127 502 IPR001932 -
Bva05g01855 517 ProSiteProfiles PPM-type phosphatase domain profile. 136 504 IPR001932 -
Bva05g01855 517 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 516 - -
Bva05g01855 517 Pfam Protein phosphatase 2C 232 455 IPR001932 -
Bva05g01855 517 PANTHER PROTEIN PHOSPHATASE 2C 2 516 IPR015655 GO:0004722|GO:0006470
Bva05g01855 517 CDD PP2Cc 149 504 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01855 Bva-Chr5 14451526 14454772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01855 4 517 PP2C-type Phosphatase Gene Family AT3G16560 62.572 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01855 - - vun:114178627 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01855 05 14451526 14454772 Bva05g01855 05 14451526 14454772 ECH