Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01839 ATGGATGGAAATAAGGATGAAGCATTGAGGTGTATTCGCATCGCTGGAGAGGCGATTGCATCAGGTAACAAAGAGCGTGcacttaaatttatcaaaattgcTCAACGCCTTAACCAGGATTTAGCTGTTGATGTACTGTTGGCCAGGTGTGAGAAGCTTGATTCTCAGTCTGCTGTATCGTCTTCAAGTGGGGACAACGTTGGCCGGGTTGAGAAAGACCAGGGTGCGGTGAAAAGTGATGGGAGTTTGAATGGAGAGAGGAGTTATACTCAAGAACATGTTCAATTAATTAGGCAGATTAAGGGGAAGAATGATTACTATGCAATTCTTGGGGTGGAGAAGACTTGTTCAGTTGAAGAGATTAGGAAGGCTTATAGGAAATTATCCTTGAAAGTTCACCCTGATAAGAATAAGGCACCGGGTTCTGAAGAGGCATTTAAGAAGGTATCCAAGGCTTTCAAGTGTTTAAGTGATGAGGATTCAAGGAGGCAGTATGATCAGGTAGGACTGGTGGAGGAATTTGAATTCAACCAGCAGCACAGTGTTAGGCGGCGGAGGAGAAGGACAAACACTCATGACTTTTTTGATGATGAATTTGATCCTGATGAGATATTTAGGGCATTTTTTGGACAAGCAGACGTTTTTGGGAGGACTCGGCATGTTTACAGGACACGAGGAATGGGCACTCAGCAGAGGGCAGAATTTCAAGGGGGAGGATTTAATGCTATGCTCCTTCTTCAACTATTACCGTTCTTGATAATTATTCTGCTTGCCTATTTGCCATATTCTGAGCCTGAATATTCTTTGCACAAGAATCCCTCATATCAGATTCCAATGACAACTGAGAACTATGAGGTAGAGTTTTATGTGAAATCTGAATCATTTGATGATAACTACCCACCTGGAAGTTCTTCTCGTGCAGATATTGAGGGTGATGTGATAagagattataaaaatttgctTCGTCGTTACTGTCAAATGGAACTCCACAGGCGTAGTTGGAATAGGAATTTGCCAACTCCTCACTGTGAAAGGCTACAAAATCTGGGAATAGCCTG 1058 0.4149 MDGNKDEALRCIRIAGEAIASGNKERALKFIKIAQRLNQDLAVDVLLARCEKLDSQSAVSSSSGDNVGRVEKDQGAVKSDGSLNGERSYTQEHVQLIRQIKGKNDYYAILGVEKTCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDEDSRRQYDQVGLVEEFEFNQQHSVRRRRRRTNTHDFFDDEFDPDEIFRAFFGQADVFGRTRHVYRTRGMGTQQRAEFQGGGFNAMLLLQLLPFLIIILLAYLPYSEPEYSLHKNPSYQIPMTTENYEVEFYVKSESFDDNYPPGSSSRADIEGDVIRDYKNLLRRYCQMELHRRSWNRNLPTPHCERLQNLGIA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01839 352 MobiDBLite consensus disorder prediction 58 84 - -
Bva05g01839 352 Pfam Domain of unknown function (DUF1977) 262 332 IPR015399 -
Bva05g01839 352 PRINTS DnaJ domain signature 141 161 IPR001623 -
Bva05g01839 352 PRINTS DnaJ domain signature 107 125 IPR001623 -
Bva05g01839 352 PRINTS DnaJ domain signature 125 140 IPR001623 -
Bva05g01839 352 PANTHER CHAPERONE PROTEIN DNAJ 49 1 351 - -
Bva05g01839 352 SMART dnaj_3 104 161 IPR001623 -
Bva05g01839 352 Gene3D DnaJ domain 102 222 IPR036869 -
Bva05g01839 352 SUPERFAMILY Chaperone J-domain 101 212 IPR036869 -
Bva05g01839 352 CDD DnaJ 105 158 IPR001623 -
Bva05g01839 352 Pfam DnaJ domain 105 166 IPR001623 -
Bva05g01839 352 ProSiteProfiles dnaJ domain profile. 105 169 IPR001623 -
Bva05g01839 352 PANTHER AT29763P-RELATED 1 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01839 Bva-Chr5 14381797 14384339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01839 99 166 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.111 3.82e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01839 K09518 - mnt:21406269 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01839 05 14381797 14384339 Bva05g01839 05 14381797 14384339 ECH