Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01821 ATGGATGGTTATCAAGACACACTCTACGTCCAATCTCAACGTCAATTCTACCGTGACTGCACCATCACCGGCACCATAGACTTCATCTTCGGCGAAGCAGAAGGAGTTTTACAGAACTGCAAGCTCATAGTGAGAAAACCCTCTCCCAAGCTCATAGACAGCAGAAAAGATGTCAACTCCAAAAGTGCACTGGTTTTCCAGAGCTGCCACTTCACTGCAGAGCCAGCATACCTTGCCTCCTCCAAGGAACTCAACGTGAGATCATATCTTGGGAGGCCATGGAGACCTTATGCAAAGACTGTCTTCGTTGATTCTGAGATTGACGCCATTTTTGACCCCGAAGGGTTTCTTGCATGGAATGGGGCCAATAACCATCAGACTGGCTTCTATTTTGAGTACAACAACAAGGGTCCTGGTGCTGACACGTCTAAGAGAGTTGCATGGCCTGGTGTCTA 455 0.4791 MDGYQDTLYVQSQRQFYRDCTITGTIDFIFGEAEGVLQNCKLIVRKPSPKLIDSRKDVNSKSALVFQSCHFTAEPAYLASSKELNVRSYLGRPWRPYAKTVFVDSEIDAIFDPEGFLAWNGANNHQTGFYFEYNNKGPGADTSKRVAWPGV 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01821 151 Pfam Pectinesterase 1 150 IPR000070 GO:0030599|GO:0042545
Bva05g01821 151 Gene3D - 1 151 IPR012334 -
Bva05g01821 151 PANTHER PECTINESTERASE 1 151 - -
Bva05g01821 151 PANTHER PECTINESTERASE 1 151 - -
Bva05g01821 151 SUPERFAMILY Pectin lyase-like 2 150 IPR011050 -
Bva05g01821 151 ProSitePatterns Pectinesterase signature 2. 22 31 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01821 Bva-Chr5 14303318 14304120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01821 1 151 Carbohydrate Esterase AT5G49180 48.718 1.49e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01821 K01051 - gmx:100784682 205.297