Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01820 ATGGTAGCTCTTATTGCCATTAGCGTACACAACAAAGACGGCAACAATGCAGAACATGGCAATGAAGTTGCAGAAAATAGCCTGAACCCAAGTTCAAGGAAGAACGTTGAGATGCTTTGTCAACCAACAATTTACAAAGAAACCTGCAAGAATACAATCTCCAAGGCTGCTTATGAAACCTCTGACCCCAAAGAACTCATCAAAACCGGGTTTAATGCCAGCATCGAAGAGCTCGAAAAGATCATGAACAACTCCACCCTCTATGCAGAACTTGCCAAGGACAACATGACAAGACAAGCCATGGATATCTGCAAGGAAGTCATGGATTTCGCACTGGACAACTTCTACCAATCTATTGACAAGTTGTCTGCTTTTGAATTGAGCAAGTTTGATGAGTATACCTATGATCTCAAGGTTTGGCTTGGAGCTACAATCACACACCAGCAAACATGTTTGGATGGGTTTGAGAAGACAAACACACAAGCTGGTGGGAAAATGGCTAAGGCATTGAATGTATCCATGGAGATGAGTAGTAATGCTCTTGCCATGTTCACTGATTTCTCTAATATGCTAAAAAATTTCAGCGGAAACGTGAACAGGAAGCTTCTGTATCAAGATGGAGATGGTTTCCCTTCGTGGGTGAGTGAAGGGCGGAGAAGGGTACTTCAGTTTGGTCCAGATGGGGTTAAGCCTAATGTGACTGTGGCTCAAGATGGGAGTGGTAATTTCACGACACTCACTGAGGCTCTTAAGACCGTCCCAAAAAAAGAATGCTGTTCCCTTTGTGATTTACGTCAAGGCTGGTTTGTATA 812 0.4323 MVALIAISVHNKDGNNAEHGNEVAENSLNPSSRKNVEMLCQPTIYKETCKNTISKAAYETSDPKELIKTGFNASIEELEKIMNNSTLYAELAKDNMTRQAMDICKEVMDFALDNFYQSIDKLSAFELSKFDEYTYDLKVWLGATITHQQTCLDGFEKTNTQAGGKMAKALNVSMEMSSNALAMFTDFSNMLKNFSGNVNRKLLYQDGDGFPSWVSEGRRRVLQFGPDGVKPNVTVAQDGSGNFTTLTEALKTVPKKECCSLCDLRQGWFV 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01820 270 PANTHER PECTINESTERASE 1 257 - -
Bva05g01820 270 CDD PMEI-like_3 39 189 - -
Bva05g01820 270 SMART PMEI_2 31 183 IPR006501 GO:0004857
Bva05g01820 270 PANTHER PECTINESTERASE 1 257 - -
Bva05g01820 270 TIGRFAM PME_inhib: pectinesterase inhibitor domain 29 185 IPR006501 GO:0004857
Bva05g01820 270 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 188 IPR035513 -
Bva05g01820 270 Pfam Plant invertase/pectin methylesterase inhibitor 36 183 IPR006501 GO:0004857
Bva05g01820 270 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 187 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01820 Bva-Chr5 14301814 14302626 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01820 16 257 Carbohydrate Esterase AT3G05610 41.057 1.92e-58 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01820 K01051 - gmx:100784682 277.715