Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01809 ATGAATTCGAATTATGGCAAATCTAACCAGCAGAAAGGCTCATCCGTTCCACTAAACaactataattttgattttgatctcGGGATCGGATCAAACAGATCCAAATCTCTCAACGATCAGAAAAATCCGAATTCATCGTattcatattcttcttcttcttcttcattttcgtCCACTCAATCGAAACCTTCATGGCAACCCAACAAGTCCTCTTGGACACATCAGCCGGCGCCGAGTCAGCCCGGATTGGCGACCGCACCCACTTCAATGGTTGGCGACATCTTTGGCAAGAGCTGGGGATCTGCTCAACCAACGGGCTCGACTTCGAATTCCAGTATTGGGATTCCCAATAAGAATCCGAATCTTTTTGGAGATTTGGTGAGCTCCGCTCTGGGGCAGGGATCTAAGGGCAGTAGTAATGTTCCTCTGAAAAGTGCAACACCTGCTGCTAAGGTATCAAGCGCCACAGCTAACAAGAGTTCATTTTCTATGGGAAATATGGCAGATTCTTTGCCTAAAGCTAGTAACACGGCACAAAGTAGTGGAAATTGGGGATCTACTGGGAATTTTGCGAGTTACAGTAGCGGAAACAATAATACTAGTATGAATGCTAGTAAAAGCCCCAATCTTGGGGGTCCTTCAGTGCGAAGTATGGGTAGTAGTGGTGCAGCTGGAAGTGGAATGCGTTCTAATAAAGACCCATTTAGTTCATTGTCTGGTTTTGGATCAAAATCATCTGGTAGTCTTAATTCAGCTGCTAAAGGTGGAAAGAGTAGTACAGATGATGATGGTTTTGGAGATTTCCAGAACGCTTCCAAACCTAGCTCTACCACATTCCCGTCTAGTAATTCCTCAGCAAGTAATTTCGGTTCTAGCTCAGGCATTGATAATGTGGGAGCTTTTGGGTTCTCCTCTCAGAAGTCTGCCACTTTGAATCAGAACCCTGCCCATACCTCAGGTGGTGATCCAATGGACATGTTTTTCTTATCTTCAGCCTCAGCTGGAAGTGCTGCTGTGGGCTCTGAAGGATTGGGAGGACAGCCATCTTCTGGAATTGATGACTGGGGGTTAGATTCTGAGTTTGGTGGTGGAGGTCATGATGTGGGTGGTACAACCACTGAGCTTGAAGGTCTTCCACCTCCTCCTGCTGGAGTCTCAGGTTCCACAGCAAAGAGTAAGGGGATGGATAATTATAAGCAAGGGCAGTTTGCTGACGCTATTAAGTGGCTATCTTGGGCTGTCATCCTTCTTGAGAAAGCAGGCGATGCTGCTGGCACAGTGGAGGTTTTGTCATGCAGAGCTTCGTGTTACAAAGAAGTGGGGGAGTATAAAAAAGCGGTGGCAGATTGTACCCAGGTGCTTGAGAACGATGATACAAACGTATCTGTCCTTGTACAACGTGCTCTCTTGTATGAGAGCATGGAAAAGTACAGACTTGGTGCTGAAGATCTGAAGACTGTTCTGAAGATTGATCCCGGTAATAGGATTGCACGAAGTACCATCCACAGGTTGAATAAGCTCGCAGATTA 1529 0.448 MNSNYGKSNQQKGSSVPLNNYNFDFDLGIGSNRSKSLNDQKNPNSSYSYSSSSSSFSSTQSKPSWQPNKSSWTHQPAPSQPGLATAPTSMVGDIFGKSWGSAQPTGSTSNSSIGIPNKNPNLFGDLVSSALGQGSKGSSNVPLKSATPAAKVSSATANKSSFSMGNMADSLPKASNTAQSSGNWGSTGNFASYSSGNNNTSMNASKSPNLGGPSVRSMGSSGAAGSGMRSNKDPFSSLSGFGSKSSGSLNSAAKGGKSSTDDDGFGDFQNASKPSSTTFPSSNSSASNFGSSSGIDNVGAFGFSSQKSATLNQNPAHTSGGDPMDMFFLSSASAGSAAVGSEGLGGQPSSGIDDWGLDSEFGGGGHDVGGTTTELEGLPPPPAGVSGSTAKSKGMDNYKQGQFADAIKWLSWAVILLEKAGDAAGTVEVLSCRASCYKEVGEYKKAVADCTQVLENDDTNVSVLVQRALLYESMEKYRLGAEDLKTVLKIDPGNRIARSTIHRLNKLAD 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01809 509 MobiDBLite consensus disorder prediction 362 392 - -
Bva05g01809 509 MobiDBLite consensus disorder prediction 1 116 - -
Bva05g01809 509 Gene3D Tetratricopeptide repeat domain 386 509 IPR011990 GO:0005515
Bva05g01809 509 MobiDBLite consensus disorder prediction 100 116 - -
Bva05g01809 509 PANTHER OS03G0340700 PROTEIN 1 509 - -
Bva05g01809 509 SUPERFAMILY TPR-like 391 501 IPR011990 GO:0005515
Bva05g01809 509 SMART tpr_5 427 460 IPR019734 GO:0005515
Bva05g01809 509 SMART tpr_5 387 420 IPR019734 GO:0005515
Bva05g01809 509 SMART tpr_5 461 494 IPR019734 GO:0005515
Bva05g01809 509 MobiDBLite consensus disorder prediction 197 290 - -
Bva05g01809 509 MobiDBLite consensus disorder prediction 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01809 Bva-Chr5 14265026 14267485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01809 402 506 Calmodulin-binding Proteins AT3G25230 31.481 3.06e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01809 - - vun:114178472 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01809 05 14265026 14267485 Bva05g01809 05 14265026 14267485 ECH