Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01804 ATGATGATTGTTGTTCGTTGCTATTGGTTTGCATGTCTGGCTCTCTTGCTGGGGTTGGGTTTAATGGCTGTAACAAATGCTCAGTTTGCTGTGAGAAGAGGGAAGAAACTGCTCCCTTATCAGACAATCTTTGTGGATcaaaatgggaaaagaaacTTTTCCACCATACAATCTGCTATAGATTCAATCCCTTCCAACAACAGTTACTGGGTTTCCATTAAAGTCAAGGCTGGCACCTATAGGGAAAAGTTGAACATTCCTCATGAAAAGCCTTACATCATCCTAAAAGGAGATGGAAAGAGAAGAACACTAGTCGTTTGGGGTGACCATGGGACACTCCTACAGAGCCCTACCTTCACATCAATGGCAGACAATGTTGTCGTCAAATGCATGAGTTTCAGGAATTCATACAACAACCCCATAAACAGTAATCCGAGGATTCAAGCAGCGGCTGCGATGATAGGAGGTGACAAGGCTTCCTTCTATCGCGTTGGCTTCTATGGCTTACAAGACACTTTGTGGGATGATCAAGGAAGACATTATTACAAGCTCTGTACCATCCAAGGCGCCGTTGATTTCATCTTCGGCGGTGGACAATCAATCTTTGAgagATGTTCGATATCAGTGATTGGTGGGGCCATAGAGGAAGGGCTTCCTGGATTTATCACAGCACAAGCGAGGTCCAGTTCACATGACGAGAGTGGGTTTGTGTTCAAGAATTGCAACATATTTGGAAATGGGACAACTTACTTGGGAAGACCATGGAGGTCTTACGCTAGAGTTGTCTTCTATAATACCAATATGTCCAACATTGTCCAACCCAAGGGCTGGGACCCATGGCATTCCATTGGCCACGAGGACAAATTAACATTTGTAGAGTATGGCTGTTTTGGGCCTGGATCAAACACTTCTCAGAGGGTGAAATGGGCCAAGAGTAATGTGGATTTAGTCTCACTTGAACAGTTGGCTAGTACGAGCTTCGTTGACTCTGAAGGTTGGCTCCAGAATCAaccatttta 1019 0.4347 MMIVVRCYWFACLALLLGLGLMAVTNAQFAVRRGKKLLPYQTIFVDQNGKRNFSTIQSAIDSIPSNNSYWVSIKVKAGTYREKLNIPHEKPYIILKGDGKRRTLVVWGDHGTLLQSPTFTSMADNVVVKCMSFRNSYNNPINSNPRIQAAAAMIGGDKASFYRVGFYGLQDTLWDDQGRHYYKLCTIQGAVDFIFGGGQSIFERCSISVIGGAIEEGLPGFITAQARSSSHDESGFVFKNCNIFGNGTTYLGRPWRSYARVVFYNTNMSNIVQPKGWDPWHSIGHEDKLTFVEYGCFGPGSNTSQRVKWAKSNVDLVSLEQLASTSFVDSEGWLQNQPF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01804 339 PANTHER PECTINESTERASE 10-RELATED 27 338 - -
Bva05g01804 339 Gene3D - 39 339 IPR012334 -
Bva05g01804 339 SUPERFAMILY Pectin lyase-like 41 335 IPR011050 -
Bva05g01804 339 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 27 338 - -
Bva05g01804 339 Pfam Pectinesterase 43 328 IPR000070 GO:0030599|GO:0042545
Bva05g01804 339 ProSitePatterns Pectinesterase signature 2. 187 196 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01804 Bva-Chr5 14251433 14253439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01804 41 286 Carbohydrate Esterase AT2G19150 46.964 6.23e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01804 - - gmx:100819252 458.373