Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01785 ATGTCGGTGACTTTGCACACAAACCTAGGCGACATCAAGTGCGAGATCTTCTGTGACGAGGTCCAGAAGGCTGCCGAGAACTTTTTAGCTCTGTGTGCTAGTGGTTATTATGATGGGACCATATTTCACCGCAACATCAAAGGTTTTATGATTCAAGGTGGAGATCCAACAGGTACTGGCAAAGGGGGCACAAGTATATggggaaagaaatttaatgacGAGATAAGAGAATCTCTTAagCACAACGCAAGGGGAGTATTGTCAATGGCTAACAGTGGTCCAAATACAAATGGGAGCCAGTTCTTCATAGCTTACGCAAAGCAGCCACATTTAAATGGACTGTATACTGTGTTTGGCAGAGTCATTCATGGATTTGAAGTACTTGATCTCATGGAAAAGACTCCAACAGGCCCAGGGGACCGGCCACTTGCAGAGATAAGGCTTAATCGTGTAACAATCCATGCTAATCCCCTGGCTGGTTA 482 0.4336 MSVTLHTNLGDIKCEIFCDEVQKAAENFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGVLSMANSGPNTNGSQFFIAYAKQPHLNGLYTVFGRVIHGFEVLDLMEKTPTGPGDRPLAEIRLNRVTIHANPLAG 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01785 160 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3 2 159 - -
Bva05g01785 160 Gene3D - 1 160 IPR029000 -
Bva05g01785 160 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 152 IPR002130 GO:0000413|GO:0003755
Bva05g01785 160 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 159 IPR044666 -
Bva05g01785 160 PIRSF Peptidylpro_ismrse 1 157 IPR024936 GO:0003755
Bva05g01785 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Bva05g01785 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 IPR002130 GO:0000413|GO:0003755
Bva05g01785 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 IPR002130 GO:0000413|GO:0003755
Bva05g01785 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Bva05g01785 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 IPR002130 GO:0000413|GO:0003755
Bva05g01785 160 CDD Cyclophilin_PPIL3_like 1 153 - -
Bva05g01785 160 SUPERFAMILY Cyclophilin-like 1 157 IPR029000 -
Bva05g01785 160 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 6 153 IPR002130 GO:0000413|GO:0003755
Bva05g01785 160 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 37 54 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01785 Bva-Chr5 14166523 14170078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01785 3 157 U-box Gene Family AT5G67530 54.839 3.99e-56 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01785 K12734 - tcc:18614279 318.546