Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva05g01772 | ATGCGAACTTCATGGGCAGATTTGGCTGCAAATTCTGCAGCTGAAAATGCAGGTCCTGGTTCTTCAGCCAGCAATGCAGGAACTAGTAACACTTCAGCTTCTGCACGGGTATATGTTCCTCCACATCTCAGGAACCGTCCACCCTCTGCTGAGTCCCCTGCTCCAGCTCATAGTGGCCCTGCGTCTGGTACTGGGCCTGGGCCTGGGCCTACTGCTAATGCTGGATCACGTTGGGCTGCGCCTAGAAATGACTGTCGTCCAGGgtatggtggtggtggtggtggtggtgctggTGGCAGTGGCCGCACGAGTGGTTGGGGAAACAGAAGCGGTGGTTGGGATAATCGAAGCAGGGAGCGGGAAGTCAATCCCTTTGGAGATGAGGATGATGCAGAGCAAGCATTCAGTGAGAAGGAGAATACAGGGATAAATTTTGATGCATATGAAGATATTCCAGTGGAGACCAGTGGTGATAATGTGCCTCCTCCTGTGAATACATTTGCAGAGATTGACTTGGGTGAAGCACTTAATCTGAATATAAGAAGGTGCAAATATGTGAAGCCAACCCCTGTTCAGCGGCATACTATCCCAATATCTCTTGCTGGACGGGATTTGATGGCTTGTGCGCAGACTGGTTCTGGAAAGACAGCTGCTTTTTGTTTCCCAATCATTAGTGGAATTATGAGGGGCCAACCTGCTCAAAGGCCTCGTGGCTACCGTGCAGTATACCCACTTGCACTTATTCTATCTCCAACTAGGGAGCTATCAATGCAGATACATGAAGAAGCCAGGAAGTTTTCATATCAAACACAGGTTAGAGTGGTAGTTGCTTATGGTGGAGCACCCATAAATCAGCAGctGCGGGATCTTGAGAGAGGGGTTGACATTCTTGTTGCAACTCCTGGGCGATTGGTAGATTTGCTGGAGAGGGCTAGAGTTTCATTGCAGATGATCagatatttagccttggatgAGGCAGATCGGATGCTGGATATGGGATTTGAGCCTCAAATAAGGAAGATTGTAGAACAGATGGATATGCCCCCACCAGGTGTCAGACAGACTATGCTGTTTAGTGCTACTTTTCCTAAAGAGATACAGAGATTGGCCTCTGACTtcctttcaaattatattttcctgGCTGTTGGAAGGGTGGGCTCAAGTACTGATTTAATTGCCCAAAGAGTTGAGTATGTTCAGGAGTCTGACAAGAGAAGTCACCTTATGGACCTTCTTCATGCGCAGAGGGCAAATGGTGTACAAGGAAAGCAAGCATTGACGTTAGTATTTGTTGAGACGAAAAAGGGAGCAGATTCACTGGAGCATTGGTTGTGTCTCAATGGCTTTCCAGCAACTACTATTCATGGTGACAGAACACAACAGGAAAGAGAACTGGCATTAAGGTCATTTAAAAGTGGAAACACTCCTATATTGGTTGCAACTGATGTGGCTGCACGTGGTCTTGATATTCCTCATGTTGCTCATGTTGTCAACTTTGATCTGCCAAATGATATTGACGATTATGTACACCGAATTGGAAGGACAGGACGAGCTGGAAAGACTGGCCTGGCGACTGCATTCTTTAATGACAACAATGCGTCTTTAGCAAGGGCTTTATCAGAGCTGATGCAAGAAGCAAATCAAGAAGTACCTATTTGGCTCTCACGGTACGCTGCTCGATCTTCCTATGGAGGAAGGAACCGCAGATCAGGAGGAGGCCGGTTTGGTAGCCGTGATTTTAGAAGGGAAGGCTCTTTCAATAGAGGGGGTGGTTCTGATTACTACAGCGCAGGCAACAGCAGTGGTGGATACGGGGCTTCTGGTGGGTATGCTGGAGGATATGGTCCTGGGGTCACTAGTGCTTGGGACTG | 1871 | 0.4613 | MRTSWADLAANSAAENAGPGSSASNAGTSNTSASARVYVPPHLRNRPPSAESPAPAHSGPASGTGPGPGPTANAGSRWAAPRNDCRPGYGGGGGGGAGGSGRTSGWGNRSGGWDNRSREREVNPFGDEDDAEQAFSEKENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHTIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQPAQRPRGYRAVYPLALILSPTRELSMQIHEEARKFSYQTQVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDLIAQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLCLNGFPATTIHGDRTQQERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNDNNASLARALSELMQEANQEVPIWLSRYAARSSYGGRNRRSGGGRFGSRDFRREGSFNRGGGSDYYSAGNSSGGYGASGGYAGGYGPGVTSAWD | 623 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva05g01772 | 623 | MobiDBLite | consensus disorder prediction | 113 | 127 | - | - | |
Bva05g01772 | 623 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 245 | 537 | IPR027417 | - | |
Bva05g01772 | 623 | SMART | helicmild6 | 438 | 519 | IPR001650 | - | |
Bva05g01772 | 623 | MobiDBLite | consensus disorder prediction | 1 | 129 | - | - | |
Bva05g01772 | 623 | MobiDBLite | consensus disorder prediction | 562 | 584 | - | - | |
Bva05g01772 | 623 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 391 | 558 | IPR001650 | - | |
Bva05g01772 | 623 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 165 | 193 | IPR014014 | GO:0003724 | |
Bva05g01772 | 623 | SMART | ultradead3 | 184 | 395 | IPR014001 | - | |
Bva05g01772 | 623 | CDD | SF2_C_DEAD | 392 | 528 | - | - | |
Bva05g01772 | 623 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 55 | 591 | - | - | |
Bva05g01772 | 623 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Bva05g01772 | 623 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 52B-RELATED | 55 | 591 | - | - | |
Bva05g01772 | 623 | Pfam | Helicase conserved C-terminal domain | 404 | 519 | IPR001650 | - | |
Bva05g01772 | 623 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 196 | 380 | IPR014001 | - | |
Bva05g01772 | 623 | Pfam | DEAD/DEAH box helicase | 189 | 369 | IPR011545 | GO:0003676|GO:0005524 | |
Bva05g01772 | 623 | Gene3D | - | 383 | 563 | IPR027417 | - | |
Bva05g01772 | 623 | CDD | DEADc_DDX3_DDX4 | 166 | 386 | IPR044763 | GO:0003724|GO:0005524 | |
Bva05g01772 | 623 | Gene3D | - | 121 | 382 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva05g01772 | Bva-Chr5 | 14082064 | 14088319 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva05g01772 | 163 | 552 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 31.458 | 5.12e-60 | 204 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva05g01772 | K11594 | - | gmx:100795756 | 957.592 |