Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01762 ATGGACTTCCAGGTGGTCGTTCTCGCCGGCGGCACCTCCAAGAAACTTGTCCCTCTCGTCTCCAAGGAGGTTCCAAAAGCTTTACTTCCAGTGGCCAACCAGCCGGTTCTGTCTTACGTTCTCGAGTTGGTGGAGCGTAGTAACCTAAAAGATACCATAGTGgtAGTTGAAGGTGAAGAAGCTACTCTTCGTGTTGGTGGTTGGATATCTGGGGCTTTTGTAGATCGTCTGCACGTTGAGGTTGCTGCAGTCCCTGAGGATGTGGGAACAGCTGGTGCGCTCCGGGCCATTGCCCACCACCTCACTGCAAAAGACATTTTGGTTATTAGTGGCGATCTTGTTTCTGATGTCCCACTTGGTGCTGTTGCAGCGGCTCATAGACGACATGACGCAGCAGTGACTGCAATGCTTTGCTCTGCTCCTGTTAGCGGAACTGCAGAGCCAGGATCTTCTGGTGGGAAAGACAAGATCAAGAAACCTGGTCGCTACGACTTATTGGGGCTGGATGCCACAAAGCagtttttactttatatagcCACTGGAGCTGAACTTGAAAAGGATCTTCGAATTCGGAAAAGTATACTCCGTGCAGTTGGCCAGATGGAAATAAGAACTGATCTCATGGATGCACATGTCTATGCATTCAAGagATTGGTTTTACAGGAAGTTTTAGATCAAAAGGATACATTTCATAGCATAAAGCAGGATGTGTTACCCTATCTTGTCCGGAACCAGCTGAAATCAGAAGTATTGTTAAATGGTACCCCACaagcagaagaaaatggaACTCAGAAGGTTATTTCTCAGAGCAGTCAACAAATGCTCTCTCAAATCCTTGTTAATGCATCTCAACCAGATTTTCATGTAAGATATGCATTGGGTCCTAATGGTTCTGCTCCTATTCGAAGAACCCATAAATGCTGTGTTTATATTACCAGCAGCAACAATTACTGTGCACGATTAAACTCTATTCAGGCATACAGTGACATAAATCGTGATGTAATAGGAGAGGCTAACCATTTGTCAGGGTATTCTTTCTCTGCTCACAACAACATTATTCATCCTTCTGCAGAGCTTGGAGCAAAAACAACTGTAGGACCACATTGTATGCTGGGTGAAGGTTCTCAGATGGGTGACAAATGCAGCGTCAAACGATCAGTTATTGGTCGTCACTGCAGGATAGGTGCTAATGTTAAGGTTGTTAATTCGGTGGTTATGAATCATGTTACCATTGGAGATGGTTGCTCAATCCAAGGCTCTGTAATCTGCAGCAACGTTCAGCTCCAGGAGCGTGTTGTACTGAAAGATTGTCAAGTTGGGGCAGGTTTTGTGGTTACTGCTGGCAGTGAGTACAAAGGGGAAGTCTTGGctaggaaagaaaaatg 1385 0.4404 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANQPVLSYVLELVERSNLKDTIVVVEGEEATLRVGGWISGAFVDRLHVEVAAVPEDVGTAGALRAIAHHLTAKDILVISGDLVSDVPLGAVAAAHRRHDAAVTAMLCSAPVSGTAEPGSSGGKDKIKKPGRYDLLGLDATKQFLLYIATGAELEKDLRIRKSILRAVGQMEIRTDLMDAHVYAFKRLVLQEVLDQKDTFHSIKQDVLPYLVRNQLKSEVLLNGTPQAEENGTQKVISQSSQQMLSQILVNASQPDFHVRYALGPNGSAPIRRTHKCCVYITSSNNYCARLNSIQAYSDINRDVIGEANHLSGYSFSAHNNIIHPSAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSVVMNHVTIGDGCSIQGSVICSNVQLQERVVLKDCQVGAGFVVTAGSEYKGEVLARKEK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01762 461 Pfam Nucleotidyl transferase 6 143 IPR005835 GO:0009058|GO:0016779
Bva05g01762 461 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 425 IPR029044 -
Bva05g01762 461 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 460 - -
Bva05g01762 461 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 345 IPR029044 -
Bva05g01762 461 CDD LbH_eIF2B_gamma_C 370 450 - -
Bva05g01762 461 Gene3D Hexapeptide repeat proteins 347 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01762 Bva-Chr5 14038531 14043742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01762 3 450 Eukaryotic Initiation Factors Gene Family AT2G34970 23.629 5.93e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01762 K03241 - zju:107410477 768.844