Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01750 ATGGCAACTTCAGTTGAACctccaaacaaaattaagccAAAGGGCAAGCACTATTACACAATATGGCAAACATTGTTTGAGATTGATACGAAATACGTTCCAATAAAACCCATTGGCCGAGGAGCTTATGGTGTAGTGTGTTCTTCTATCAACAGGGAAACCAATGAGAAAGTTGCAATTAAGAAGATTGGTAATATATTTGAGAACAGGATTGATGCATTGAGAACTCTGAGGGAGTTGAAGCTGCTAAGACATATTCGGCATGAGAATGTGATTGCTTTGAAGGATGTCATGATGCCTATCCACAGAACAAGTTTTAAGGATGTATACTTGGTTTATGAACTCATGGATACAGATCTTCATCAAATTATCAAGTCCTCACAGCCACTTTCAAATGATCattgcaaatattttatatttcagCTGCTGCGGGGTCTTAAATATCTTCATTCTGCTAATATCCTTCACCGGGACTTAAAGCCTGGGAATCTCCTTATCAATGCCAATTGTGATTTGAAGATATGTGACTTTGGGCTTGCGCGAACCAATGGGGGCATTGGGCAGTTTATGACTGAGTATGTTGTCACTCGCTGGTATCGTGCTCCGGAGCTCTTGTTATGCTGTGACAATTATGGAACTTCTATAGATATCTGGTCTGTAGGATGCATCTTTGCTGAGATTCTTGGCAGAAAACCAATCTTTCCTGGAACTGAGTGCCTTAATCAGCTGAAACTAATCATAAGTGTTCTGGGAAGCCAGCAAGAATCTGATCTTGAGTTTATTGATACTCCAAAGGCCAGGAGGTATATCAAATCCTTGCCCTATACAAGGGGCAGACACTTCTCTCAACTATACCCACAAGCTGATCCATTAGCCATAGACTTATTGCAGAAAATGCTTGTGTTTGATCCAACAAAGAGAATTACTGTCATAGAAGCACTCCAACACCCTTATATGGCAGGCCTGTATGATCCAAGGTGTAATCCTCCTGCGCAGGTTCCGATCAATCTCGACATAGATGAGAATTGGGGTGAGCCCATGATCAGGGAAATGATGTGGAATGAGATGCTGCATTATCATCCTGAAGCTGCTTCTGCCAATGCATA 1106 0.4033 MATSVEPPNKIKPKGKHYYTIWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFENRIDALRTLRELKLLRHIRHENVIALKDVMMPIHRTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFIFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGGIGQFMTEYVVTRWYRAPELLLCCDNYGTSIDIWSVGCIFAEILGRKPIFPGTECLNQLKLIISVLGSQQESDLEFIDTPKARRYIKSLPYTRGRHFSQLYPQADPLAIDLLQKMLVFDPTKRITVIEALQHPYMAGLYDPRCNPPAQVPINLDIDENWGEPMIREMMWNEMLHYHPEAASANA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01750 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bva05g01750 368 CDD STKc_TEY_MAPK 26 361 - -
Bva05g01750 368 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01750 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 365 - -
Bva05g01750 368 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
Bva05g01750 368 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01750 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Bva05g01750 368 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Bva05g01750 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 365 - -
Bva05g01750 368 Gene3D Phosphorylase Kinase; domain 1 19 354 - -
Bva05g01750 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Bva05g01750 368 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01750 Bva-Chr5 13981466 13984373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01750 1 368 MAP Kinase Gene Family AT2G18170 85.598 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Bva05g01750 Pkinase 3.5e-69 CL0016