Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01745 ATGAGGAACCCGTCATCGTCATCTGCAGCAGGAGCAACGACGTCgtctgctgctgctgctgctgctgctggtAGTAACAGTAACAATAACacaagcagcagcagcagaacTCCATGCTGTAGCAAAGTGGGTCTCAAGAGAGGGCCATGGACTCCAGAAGAAGACGAGCTTTTATCAAATTACATAAGGAAAGAAGGAGAAGGCCGATGGCGGACTCTCCCAAAGCGCGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGTCTCCGTTGGATGAACTACCTCCGCCCCTCTGTCAAGCGGGGCCAGATCGCCCCCGACGAGGAAGATATCATCCTCCGCCTCCATCGTCTCCTCGGCAACCGGTGGTCCTTGATAGCTGGCAGAATTCCAGGGAGAACAGATAATGAGATAAAGAATTACTGGAATACCCATCTCAGCAAGAAGCTTATAAGCCAAGGGATTGATCCAAGAACCCACAAGCCCCTTAACCCTAATTCATCTTCTGAAAACCCTCCAAATGCAATTCCCAACCatggttcttcttcttcatcaaaacCCACCACTGcccctcttcctcttcctcctcctcaACCTAATCCAATCTCTACCGATGATGATCAGGAAACCCCACCTGCTGTGAACCAAGAAAATGGCTACTTTACTGTGGATCAGTATCAAGCTTATGAGAATCTACCGGCAGCAGCTGTGACGGATTCTGATCATGGATCTGCAGTGGGGTTCAGAAGCAACAATACTATCATTCACAATGAAGATGATCATGAGGATATAAATTACTGTTCTGATGATGTGTTCTCTTCTTTCCTCAATTCACTCATCAATGAGGAAGCTTTTGCTTCTCAACACCAGCTCCAGCAGTACCCTACAAATAATGGGATTCATGCAGCAGAATCTTCTGAACCTTTGATTACAAACATCCACCCATCAAGTTTTGGATTTGGCACTATTGGCTGGGAATCGGCAATCATGGCTTCTGCATCTGCTTTTGCACAAAATGACCCCAAGAGGAAAGAACACGTTGAATA 1043 0.4314 MRNPSSSSAAGATTSSAAAAAAAGSNSNNNTSSSSRTPCCSKVGLKRGPWTPEEDELLSNYIRKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGQIAPDEEDIILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLNPNSSSENPPNAIPNHGSSSSSKPTTAPLPLPPPQPNPISTDDDQETPPAVNQENGYFTVDQYQAYENLPAAAVTDSDHGSAVGFRSNNTIIHNEDDHEDINYCSDDVFSSFLNSLINEEAFASQHQLQQYPTNNGIHAAESSEPLITNIHPSSFGFGTIGWESAIMASASAFAQNDPKRKEHVE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01745 347 MobiDBLite consensus disorder prediction 1 40 - -
Bva05g01745 347 ProSiteProfiles Myb-like domain profile. 42 94 IPR001005 -
Bva05g01745 347 Gene3D - 44 100 - -
Bva05g01745 347 Gene3D - 103 173 - -
Bva05g01745 347 SMART sant 46 96 IPR001005 -
Bva05g01745 347 SMART sant 99 147 IPR001005 -
Bva05g01745 347 PANTHER TRANSCRIPTION REPRESSOR MYB5-LIKE 30 332 - -
Bva05g01745 347 MobiDBLite consensus disorder prediction 1 45 - -
Bva05g01745 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 149 IPR017930 -
Bva05g01745 347 ProSiteProfiles Myb-like domain profile. 95 145 IPR001005 -
Bva05g01745 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 94 IPR017930 -
Bva05g01745 347 CDD SANT 105 145 IPR001005 -
Bva05g01745 347 CDD SANT 49 94 IPR001005 -
Bva05g01745 347 Pfam Myb-like DNA-binding domain 104 145 IPR001005 -
Bva05g01745 347 Pfam Myb-like DNA-binding domain 47 94 IPR001005 -
Bva05g01745 347 SUPERFAMILY Homeodomain-like 44 141 IPR009057 -
Bva05g01745 347 MobiDBLite consensus disorder prediction 151 215 - -
Bva05g01745 347 MobiDBLite consensus disorder prediction 158 187 - -
Bva05g01745 347 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 30 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01745 Bva-Chr5 13954106 13955253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01745 33 305 MYB Transcription Factor Family AT3G13540 53.047 3.52e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva05g01745 Myb_DNA-binding 2.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01745 K09422 - jre:108982488 372.859