Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01743 ATGGAGCACCAAAAGAAGGCAGAGAGCTCTTCAACCAACCAACCACAGCTCATTTCTGAGACTGGTGCTGTTGTCAAAGCCACCAGAGCGAAGCCAGATTGTCCTCGACCCATCAAGGACCGCCATTGCAAGGTGAATGGGCGAGACCGCCGTGTGCGGTTGCCTGTGTCATGTGCTGCTCGTATCTTCGAACTCACCCGTGAGCTCGGCAACAAAACTGATGGCGAGACCATTGAGTGGCTTTTACGCCAGGCTGAACCCTCAATTTTGGCCGTAACTGACAAAGGCAGAGGCCAATCCTCGGCTTCATCGGACTCTGTTGTGGTTTCTGCAATTGCATCTGCACCACCCTCCGGGTCTCTGAGTGAGGGCAACCCTGTGAGTGCTCATTGTCCgaattcaaattttgtcaCGAACTGTGTTGGCTCAGCCTCAATTTCTAGGGTTGACCCAGAATTTGAATTGCCGTCAGACTTTGAAATACGATTTTCTGCTAGTGAGATAGCTATCATCCAATCCATTTTCGGAATCAAAGACTG 539 0.4972 MEHQKKAESSSTNQPQLISETGAVVKATRAKPDCPRPIKDRHCKVNGRDRRVRLPVSCAARIFELTRELGNKTDGETIEWLLRQAEPSILAVTDKGRGQSSASSDSVVVSAIASAPPSGSLSEGNPVSAHCPNSNFVTNCVGSASISRVDPEFELPSDFEIRFSASEIAIIQSIFGIKD 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01743 179 Pfam TCP family transcription factor 39 111 IPR017887 -
Bva05g01743 179 ProSiteProfiles TCP domain profile. 38 92 IPR017887 -
Bva05g01743 179 PANTHER TRANSCRIPTION FACTOR PCF1-LIKE 20 176 - -
Bva05g01743 179 MobiDBLite consensus disorder prediction 1 23 - -
Bva05g01743 179 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 176 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01743 Bva-Chr5 13941242 13941781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01743 17 109 TCP Transcription Factor Family AT5G23280 54.839 1.17e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva05g01743 TCP 3.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01743 - K16221 jre:108987029 122.479