Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01731 ATGAGGCAAGCTGACATTAAGGTTTGTTATCCGATGGAGATGGACTACGTTACAGATTTTCCTTACTCTCACATGGATCGCCGTCCCAGGAAAAGGGCAAAGTTAGCTCGGGAAATTCCACAAACTCAAACCCACTCTAAGGCTTATTCAGGAATTTATTATGGACAAGAGGTTGGCAGTGTGACAAGCTTTGGAACTTCAAGGGTACTCCCAGACTATGCTGGTCTATCTCTAAAGGGATTGGCTGAGAAAGGTTCTCCTCCATGGCGAGATGATGACAAGGATGGACATTACATGTTTGCACTTGGAGAGAATTTAACCTCACGCTATAAGATCCTCAGAAAAATTGGTGAAGGGACCTTTGGTCAGGTTTTGGAATGTTGGGATAGAGAAATGAGGGAGCCAGTTGCCATTAAAGTTGTACGTAGTATTAAGAAATATCGTGAGGCAGCAATGGTAGAAGTTGATGTGCTCCAGTTGCTTGGGAAGTATGACAGGAATAGCAGTCGTTGTGTTCAAATACGGAACTGGTTTGACTATCGTAACCATATTTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTCCGGAAGAACAATTATCGCCCATTTCCTGTTGATCTTGTCCGAGAGCTAGGCAGACAACTGTTGGAATGTGTAGCATTTGTGCATGATTTGCGCCTCATCCACACTGACCTGAAGCCTGAGAACATACTTTTTGTTTCCTcagaatatataaaagtcCCGGACTTAAAGGCTACATCCCGTTCACCAAAAGAGGGTACCTCTTACAAGAGACTCCCAAAGTCAAGTACTATTAAAGTTATTGATTTTGGTAGCACAGCCCATGAGCAACAAAATCACAAGAATAACTACATTGTCTCTACTAGGCATTATCGAGCACCTGAGGTTATCCTAGGTCTTGGATGGAGTTTCCCTTGTGACATATGGAGTATTGGTTGCATTTTGGTTGAGTTGTGTTCGGGAGAAGCTTTGTTTCAGACACATGAGAATTTAGAGCACCTAGCCATGATGGAGAGGGTTTTGGGCCCAATACCTCAGCACCTTTTGAACAGAGCAGACCGGCAGGCACAGAAGTATCTGAGAGGGGGTAGACTGGACTGGCCAGAAGGTGCAGTATCTCGTGAAAGCATCAAGGCCGTCTTGAAACTACCTCGTCTTCCTAATCTGGTGATGCAGCATGTGGATCACTCTGCAGGGGATCTTATTGACCTTTTGCAGGGTCTTCTTCGGTTCGACCCCTACCGGAGATTGACGGCTCAAGAAGCGCTCAGGCATCCCTTCTTTACCAGGGAACATTATAAGAGATTCTG 1343 0.4423 MRQADIKVCYPMEMDYVTDFPYSHMDRRPRKRAKLAREIPQTQTHSKAYSGIYYGQEVGSVTSFGTSRVLPDYAGLSLKGLAEKGSPPWRDDDKDGHYMFALGENLTSRYKILRKIGEGTFGQVLECWDREMREPVAIKVVRSIKKYREAAMVEVDVLQLLGKYDRNSSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRELGRQLLECVAFVHDLRLIHTDLKPENILFVSSEYIKVPDLKATSRSPKEGTSYKRLPKSSTIKVIDFGSTAHEQQNHKNNYIVSTRHYRAPEVILGLGWSFPCDIWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPIPQHLLNRADRQAQKYLRGGRLDWPEGAVSRESIKAVLKLPRLPNLVMQHVDHSAGDLIDLLQGLLRFDPYRRLTAQEALRHPFFTREHYKRF 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01731 447 ProSiteProfiles Protein kinase domain profile. 110 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01731 447 SUPERFAMILY Protein kinase-like (PK-like) 97 443 IPR011009 -
Bva05g01731 447 Gene3D Phosphorylase Kinase; domain 1 97 190 - -
Bva05g01731 447 SMART serkin_6 110 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01731 447 ProSitePatterns Protein kinases ATP-binding region signature. 116 146 IPR017441 GO:0005524
Bva05g01731 447 Gene3D Transferase(Phosphotransferase) domain 1 164 439 - -
Bva05g01731 447 Pfam Protein kinase domain 110 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01731 447 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 12 446 - -
Bva05g01731 447 PANTHER KINASE AFC1 12 446 - -
Bva05g01731 447 CDD PKc_CLK 97 439 - -
Bva05g01731 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01731 Bva-Chr5 13854324 13858522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01731 95 443 MAP Kinase Gene Family AT3G59790 27.397 4.74e-28 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Bva05g01731 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01731 K08287 - qsu:112037155 761.525