Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01721 ATGGCTTCTACAACTTACTTGTCTAAGCGCCAAAATCCTGATAAAGTCACTCACTGTAAGCCAGATGTTTGCCTCGAAGATGCTCGAGTGTTTCTCCCACAGCAGTTATCTAAGATTTCTAGCCAAGGAGATTCAGAATTTAAGAATGAAGTTATGATAGTGGCAAAGCTTAAGCACCGAAATTTGGTTAGGCTTCTTGGATTCAGTctggaaagaaaggaaaggctTCTTATTTATGAGTTTGTTCCTAATAAAAGCCTAAATTACTTCATATTTGGTAAGTGGGACAAACACAGTACTTCAAAGCATGACAAACCCATGTTAATTAGCCTTTTGGAAGCTAGAGACAAtcactttttcatttcatgtta 371 0.3369 MASTTYLSKRQNPDKVTHCKPDVCLEDARVFLPQQLSKISSQGDSEFKNEVMIVAKLKHRNLVRLLGFSLERKERLLIYEFVPNKSLNYFIFGKWDKHSTSKHDKPMLISLLEARDNHFFISC 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01721 123 Gene3D Phosphorylase Kinase; domain 1 11 81 - -
Bva05g01721 123 SUPERFAMILY Protein kinase-like (PK-like) 38 97 IPR011009 -
Bva05g01721 123 Pfam Protein tyrosine and serine/threonine kinase 37 99 IPR001245 GO:0004672|GO:0006468
Bva05g01721 123 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 94 - -
Bva05g01721 123 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 25 25 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01721 Bva-Chr5 13812611 13813341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01721 34 92 Receptor kinase-like Gene Family AT3G45860 74.576 2.73e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva05g01721 PK_Tyr_Ser-Thr 3.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01721 - - gmx:100305371 101.293