Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01718 ATGAAGAGATCACTTGGCAGCTCAGATTCTTTGGGTGGTCTCATCACCATCTGTCCATCAACAGACGAACACAGTCCGAGGAACAACGATGTGTATGGTAGGGAGTTCCAATCCATGCTCCATGGACTAGATGAAGAAGGCCGTGTTGAAGAATCGGGCCATGTCTCTGAGAAGAAACGGAGACTCAGTGTTGAACAAGTCAAGGCTTTGGAGAAGAACTTCGAAGTGGAGAATAAGCTTGAACCTGAGAGAAAGGTGAGGCTTGCTCAAGAGCTTGGCTTGCAGCCCAGACAAGTTGCCGTTTGGTTCCAAAACCGCCGTGCAAGATGGAAAACCAAGCAACTCGAGAGAGATTATGGCGTTCTCAAAGCCAATTATGAAGCTCTCAAGCTCAACTTTGAGTCCCTTCAAAACGACAATGAAGCTTTACGCAAGGAGATTATGGAATTGAAATCAAGACTGCAAGAAGATAACACGGAAAGCGAAGTTTCAGTGAAGGAAGAGATAAATCTGCTGCCGGATTCCGACGACAAAATGATCGAAACCTCCATTCCCGGATCGGAGTCCAAGGAATTGAAGTACGATTGCttcaacagcagcagcaatcGAGTGGGATCAGCCGCCGCGAAACTCTTCCCGGTGGACTTGAAAGACGGCGCTTCAGATAGCGATTCCAGCGCAATCTTGAATGAAGATAATAACAGCCCGAACGGGGCCATTTCTTCATCTGGGGTTCTTCAGAATCACCAGCTTTTGATGTCTCCACCAGGATCATCTTCATCGCCGTCGTCGACCGTGAACTGCTTCCAATTCCAGAGAACATACCTACCGCAATATGTGAAAACGGAGGAGCACAATTTCTTCGGCGCCGACGACGACGAGGCCTGCAATTTCTTCTCCGATGAGCAAGCACCCACCCTCCAGTGGTACTGCTCGGACCAATGGAGTTg 950 0.4768 MKRSLGSSDSLGGLITICPSTDEHSPRNNDVYGREFQSMLHGLDEEGRVEESGHVSEKKRRLSVEQVKALEKNFEVENKLEPERKVRLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYEALKLNFESLQNDNEALRKEIMELKSRLQEDNTESEVSVKEEINLLPDSDDKMIETSIPGSESKELKYDCFNSSSNRVGSAAAKLFPVDLKDGASDSDSSAILNEDNNSPNGAISSSGVLQNHQLLMSPPGSSSSPSSTVNCFQFQRTYLPQYVKTEEHNFFGADDDEACNFFSDEQAPTLQWYCSDQWS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01718 316 SUPERFAMILY Homeodomain-like 44 115 IPR009057 -
Bva05g01718 316 MobiDBLite consensus disorder prediction 1 30 - -
Bva05g01718 316 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Bva05g01718 316 Gene3D - 53 120 - -
Bva05g01718 316 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Bva05g01718 316 SMART HOX_1 56 117 IPR001356 GO:0003677
Bva05g01718 316 Coils Coil 112 160 - -
Bva05g01718 316 MobiDBLite consensus disorder prediction 223 242 - -
Bva05g01718 316 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE 1 308 - -
Bva05g01718 316 Pfam Homeodomain 58 111 IPR001356 GO:0003677
Bva05g01718 316 PRINTS Lambda-repressor HTH signature 84 93 IPR000047 GO:0003677
Bva05g01718 316 PRINTS Lambda-repressor HTH signature 93 109 IPR000047 GO:0003677
Bva05g01718 316 MobiDBLite consensus disorder prediction 222 242 - -
Bva05g01718 316 MobiDBLite consensus disorder prediction 1 26 - -
Bva05g01718 316 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 308 IPR045224 GO:0003700
Bva05g01718 316 Pfam Homeobox associated leucine zipper 113 155 IPR003106 GO:0006355|GO:0043565
Bva05g01718 316 CDD homeodomain 58 114 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01718 Bva-Chr5 13782258 13784269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01718 1 315 Homeobox Transcription Factor Family AT2G22430 48.387 3.26e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva05g01718 Homeodomain 3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01718 K09338 - qsu:112039557 431.024