Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01700 ATGAACGGAGAAAGCCGAAGACGAGGCGGCGACCGGGACCGGGACCGCCGAAATCCGCGCAGATCCAAGAAGCAAAAACTAATCCGCACTGTTGAGGAAGAGCTCGAGTCAAAGCTAGGGTTCGATCTATTCTCCGAGGGCAAAAAAAGGCTTGGATCGTTGCTTAACTTTGCATCTTCATCCTGGGAGGACGAAGAGACCCATAAGGATGGTTCCACATTTAAGTCAAAATACTGGTTTCGCCCTTATTTCGATGCTGTCACAAAGATTGCAGATATTGAAATTGCCGAGAAGGAAAACCTTGAACTTAAAAACCATTTGTCTGGGTtacaaaaatcttatttaaagaTGTCTTTTGATACCGTGCAACAACTAATGAATGTGAAGAGTGATCTGATGCATGTTGTGGAAAGAAATCAGGCAAAGTCTGATATTGCAGAAGCCTACGAGTCCATATTAACtGTTGGAGTTGATATAGATGATTTGGAGTACACTCCAAAACCAAAGTATGAAGGGTGTTTTAAGGTGACAAATGTCCTAAACGAGGTTGAGCTTCTTAAATTGTGGTTTTCCCATATGCAAGATGTGAAGCCATATATGTCACGTATAATGGAGTTAGGGTTTCAATGGGACAAGGGTCAAGGCGAATGTCGTGCAAAATTTGCTTGGGTTAAATGTGATAGTTATCTCCCTCAAGGGAGCCATGGCCATAAGGCTGTAACAAAGGCAAAATTGGGTTATGATCCCTGGAGTTG 755 0.4238 MNGESRRRGGDRDRDRRNPRRSKKQKLIRTVEEELESKLGFDLFSEGKKRLGSLLNFASSSWEDEETHKDGSTFKSKYWFRPYFDAVTKIADIEIAEKENLELKNHLSGLQKSYLKMSFDTVQQLMNVKSDLMHVVERNQAKSDIAEAYESILTVGVDIDDLEYTPKPKYEGCFKVTNVLNEVELLKLWFSHMQDVKPYMSRIMELGFQWDKGQGECRAKFAWVKCDSYLPQGSHGHKAVTKAKLGYDPWS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01700 251 Coils Coil 93 113 - -
Bva05g01700 251 MobiDBLite consensus disorder prediction 1 28 - -
Bva05g01700 251 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 155 249 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Bva05g01700 251 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 39 154 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Bva05g01700 251 MobiDBLite consensus disorder prediction 1 18 - -
Bva05g01700 251 Pfam DNA polymerase family B, exonuclease domain 158 198 IPR006133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01700 Bva-Chr5 13665645 13669939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01700 154 249 Core DNA Replication Machinery Family AT1G08260 57.143 7.50e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01700 K02324 - csin:114310357 202.986