Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01674 ATGACGCAGCAGAGTGTAGTGGTGTCTGATCCCAATTCAGGAATCAACATGGCCATCACCGTGGCCGTAACCACCTCGTCGATATTTACGACGGCGGCACAGAAACTGCCGGCGCCACATGGAGGGTACATTTCCATTTCAAGGAAGAAGCTTTTAAAGAACCTGGATATCAATGGGCTTGGAGGAGCAAGAATTAATGCCTGGGTTGAATCCATGCGAGCCTCTTCTCCAACCCATGTCAAATCCAATTCCATTCCTGATGATCATGGCTCTTGGATTGTTCACCGGCCATCTGCATTAGACATGTTTCAGCAGATAATTGATGCTTCTAAAGGGAAGCAAATTGTTATGTTTCTGGACTATGATGGTACACTGTCACCGATCGTCGATGACCCTGACCGTGCTTTCATGTCCGATGCAATGAGAAAAACAGTGAGAAAAGTGGCCAGATGTTTTCCAACAGCTATAGTAAGCGGCAGATGCAGAGAGAAGGTATACAATTTTGTTCGCTTAGCGGAGCTATACTATGCTGGAAGTCATGGAATGGATATTAAAGTCCCAAAACCAACAAGAAGAAGCTCCAAATATCACAAAGCGAATGACAACCATGCAGTTCTTTTTCAACCTGCCAGTGAATTTCTTCCAGTGATAGATGAAgTGTACCAGCAGTTagttgaaaaaacaaaatcaacccCAGGGGCAATAGTGGAAAATAATAGGTTCTGCGTGTCTGTCCATTTTCGCTGCGTTGATGAAAAGAAATGGAGTGAACTAGCTCACCAAGTTAGATCAGTGTTGAAGGAGTATCCCAAGCTTCGTCTTAGCCAAGGAAGAAAGGTATTGGAGATTCGTCCCACCATTAAATGGGACAAGGGGAATGCCttggaatttttattagaGTCACTAGGATTTGCCAACTGCACCGATGTTTTTCCTGTTTACATTGGAGATGATCGAACTGATGAAGATGCATTTAAGAAATTAAGAGACAGAGGACAAGGTTTTGGGATTCTTGTCTCCAAATTTCCAAAAGACACCTCTGCATCTTACTCTTTGCAGGAACCCGATGAGGTGATGGACTTTCTACAACGTTTGGTAGACTGGAAACGACTATCTCTGCGGGCACATTCCAGAGTGTA 1139 0.4293 MTQQSVVVSDPNSGINMAITVAVTTSSIFTTAAQKLPAPHGGYISISRKKLLKNLDINGLGGARINAWVESMRASSPTHVKSNSIPDDHGSWIVHRPSALDMFQQIIDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDAMRKTVRKVARCFPTAIVSGRCREKVYNFVRLAELYYAGSHGMDIKVPKPTRRSSKYHKANDNHAVLFQPASEFLPVIDEVYQQLVEKTKSTPGAIVENNRFCVSVHFRCVDEKKWSELAHQVRSVLKEYPKLRLSQGRKVLEIRPTIKWDKGNALEFLLESLGFANCTDVFPVYIGDDRTDEDAFKKLRDRGQGFGILVSKFPKDTSASYSLQEPDEVMDFLQRLVDWKRLSLRAHSRV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01674 379 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 21 378 IPR044651 GO:0004805|GO:0005992
Bva05g01674 379 CDD HAD_TPP 116 359 - -
Bva05g01674 379 Pfam Trehalose-phosphatase 118 355 IPR003337 GO:0003824|GO:0005992
Bva05g01674 379 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 117 331 IPR006379 -
Bva05g01674 379 SUPERFAMILY HAD-like 116 369 IPR036412 -
Bva05g01674 379 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 21 378 - -
Bva05g01674 379 TIGRFAM T6PP: trehalose-phosphatase 113 366 IPR003337 GO:0003824|GO:0005992
Bva05g01674 379 Gene3D - 217 377 IPR023214 -
Bva05g01674 379 Gene3D - 115 208 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01674 Bva-Chr5 13506097 13509386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01674 111 367 Trehalose Biosynthesis Gene Families AT1G70290 26.909 1.38e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01674 K01087 - rcu:8261645 600.897