Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01673 ATGGCTGCAGCTATAGATATGTATAATTTCAACGTGACAACAGATTTCCCAGATCTTTACAGTGAAGAGCTGTTGAAAGCTCTTGAACCTTTTATCAAAAGTGATTCGTCTATAACTTCTTCCCCCTCTTGCTCTTACACTTCAGTTTCTTCCTCTATTCCCAATTTGCATCCCAACCTGGGGTTCTCGAGCTATGATGGGCGGAGCAGTCCCATTGGGCTTAATCAACTTACAGCATCTCAAATTCTTCAGATTCAAGCTCAATTCCAGCtccaacagcagcagcagcagcaaaaagtttcttcctttcctgCAGGTTCCCTCAAAAGCCAGTTGCTTGGCCCCAAAGCCACCCCCATGAAGCATGTGGGTAATCCTCCAAAACCCACAAAACTCTACCGCGGGGTAAGACAGCGGCACTGGGGGAAATGGGTTGCAGAGATCAGACTCCCCAAGAATCGCACTCGTCTCTGGCTGGGTACTTTTGATACTGCAGAGGAAGCTGCTTTGGCTTACGACAACGCAGCGCATAAGCTAAGGGGAGAGTTTGCTCGCCTTAATTTTCCTCATCTCAGGCACCACGGAGCTCATGTCTATGGTGAATTTGGTGACTACAAGCCTCTCCATTCCTCTGTCGATGCTAAGCTCCAAGCAATTTGCAAAACCTTGGCGATTCCGGAGAAAGACAAGCCCTGCTCCGATGATGACACAAAACCCAATATTCAGGCTCCTGTTCTGTTGCAGCCAAAGCCGGAACTTGTGTTCGATGAGGTAAAACCGAAAACCGAAATCGGATGTACGGAATTTGAGGATTATAAAGTGGGAAACCCGATTCCATCATCATCAGATGAATGGTCTGCTGGTTCGTCTTCACCTGAATCTGATACcactttctttgatttctcGGGTTCCAACTGGGATGAAGGTGAAACTGACAACTTTGGGTTGGCTAAATATCCTTCGGCGGAGATTGACTGGGCTGCTCTTTG 989 0.4459 MAAAIDMYNFNVTTDFPDLYSEELLKALEPFIKSDSSITSSPSCSYTSVSSSIPNLHPNLGFSSYDGRSSPIGLNQLTASQILQIQAQFQLQQQQQQQKVSSFPAGSLKSQLLGPKATPMKHVGNPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAHKLRGEFARLNFPHLRHHGAHVYGEFGDYKPLHSSVDAKLQAICKTLAIPEKDKPCSDDDTKPNIQAPVLLQPKPELVFDEVKPKTEIGCTEFEDYKVGNPIPSSSDEWSAGSSSPESDTTFFDFSGSNWDEGETDNFGLAKYPSAEIDWAAL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01673 329 MobiDBLite consensus disorder prediction 275 302 - -
Bva05g01673 329 SMART rav1_2 132 195 IPR001471 GO:0003700|GO:0006355
Bva05g01673 329 PRINTS Ethylene responsive element binding protein signature 133 144 IPR001471 GO:0003700|GO:0006355
Bva05g01673 329 PRINTS Ethylene responsive element binding protein signature 155 171 IPR001471 GO:0003700|GO:0006355
Bva05g01673 329 SUPERFAMILY DNA-binding domain 132 190 IPR016177 GO:0003677
Bva05g01673 329 Gene3D AP2/ERF domain 132 190 IPR036955 GO:0003700|GO:0006355
Bva05g01673 329 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 329 - -
Bva05g01673 329 CDD AP2 131 191 IPR001471 GO:0003700|GO:0006355
Bva05g01673 329 ProSiteProfiles AP2/ERF domain profile. 132 189 IPR001471 GO:0003700|GO:0006355
Bva05g01673 329 MobiDBLite consensus disorder prediction 279 302 - -
Bva05g01673 329 Pfam AP2 domain 133 182 IPR001471 GO:0003700|GO:0006355
Bva05g01673 329 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01673 Bva-Chr5 13490699 13492147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01673 3 329 AP2-EREBP Transcription Factor Family AT4G39780 48.328 4.16e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva05g01673 AP2 5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01673 K09286 - tcc:18611594 329.717