Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01658 ATGGCAACATCAGTGGCTTGGAGGTATTCTCCCAGCAATGGCAGCAGCCATGCTGCTAATAATCTGGAAAGAAATGGAGAGGGGAAGACACACGATTCAGAGACACCAACTCCACATTCTGTTCTAAAGATGGGATTGAGGGAACGAAACAGCAGCATGGAGGACCCAGAAGGGACATTAGCAAGTGTTGCCCAATGCATTGAACAGCTGCGTCAGAGTTCATCATCAGCACAAGAGAAAGAGTATTCTTTGAGACAGTTATTGGAGCTTATTGACATGCGTGAAAATGCATTCAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCTGTACTTGTTTCTCTTCTGCGGTCAGGATCATTGAGTGTGAAGATACAGGCGGCTGCTGTCTTGGGTTCCCTTTGTAAAGAAAATGAGCTGAGGGTGAAAGTCTTGCTTGGAGGATGCATTCCTCCATTGCTTGGTCTACTTAAGTCAAGCTCAGCTGAGGGCCAAGTTGCTGCTGCAAAGACTATATATGCTGTCTCTCAAGGTGGTGCTAAAGATCATGTTGGTTCAAAAATTTTTTCAACTGAAGGAGTTGTTCCAGTGCTCTGGGAGCAGCTTGAAAAGGGGATGAAAACAGGAAATGTAGTAGTTAGCTTGTTGACTGGAGCATTGAAAAATCTATCCAGCAGCACTGAGGGGTTCTGGAATCTAACAATACAAGCTGGGGGAGTGGACATATTAGTGAAGTTACTGACAACAGGAGAGTCTAACAATTTAGCTAATGTGTGCTTTTTACTTGCCTGCATGATGATGGAGGATGCATCTCTTTGTTCAAAGGTGTTAGCAGCAGAGGCCACAAAACAGCTTCTCAAGCTATTAGGGCCGGGTAATGATGCCCCTGTAAGGGCTGAAGCAGCTGGTGCTCTTGAATCACTTTCTGCCCAGTGCAAAGAAGCAAGGTGGGAGATAGCCAATTCTAATGGCATTCCTGCTTTGATAAATGCTACTATAGCTCCTTCTAAAGAATTTATGCAGGGTGAGTATGCTCAAGCATTACAGGAGAATGCCATGTGCGCTTTAGCAAACATATCTGGTGGTTTGTCTTATGTCATCTCTAGCCTTGGTCAAAGCCTTGAATCATGCACCTCTCCTGCCCAAATTGCTGACACATTAGGGGCTTTAGCATCAGCCCTTATGATATATGATAGCAAGGCAGAATCTACTAGAGCATCAGACCCTTTGGCAGTTGAGCAGACATTGCTCAAGCAATTCAAACCACGCTTGCCCTTTCTTGTGCAGGAACGAACCATAGAAGCCCTAGCTAGTTTGTATGGTAACCCCATACTCTCAATCAAACTTGCAAACTCTGATGCAAAACGTTTGCTTGTTGGTTTAATAACTATGGCTACCAATGAAGTGCAAGATGAGCTTATAAAAGCTCTCTTGACACTCTGCAATAATGAAGACAGTCTATGGCGTGCACTTTTGGGCCGTGAGGGAGTTCAGCTGTTGATATCCCTTCTGGGGCTTTCATCAGAACAGCAGCAAGAAtgtgcagtttcccttctttGCCTTCTAtctaatgaaaatgatgaaagtaAATGGGCCATTACTGCTGCTGGTGGTATACCTCCACTTGTTCAAATTTTGGAGACAGGATCTGCAAAGGCGAAGGAGGATTCAGCATTAATCCTTGGGAACCTGTGCAATCATAGTGAAGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCACTACTGTGGCTATTGAAGAATGGCAGCCCAAATGGAAAGGAAATTGCAGCGAAGACTCTAAAtcatttaattcataaatctgATACTGCAACTATCAGTCAGCTTACTGCTTTATTAACTAATGATCAACCTGAGTCTAAGGTCTATGTTTTGGATGCCTTGAAAAGTATGCTTTCTGTTGTTCCCTTTAGTGACATTCTACGTGAAGGTAGTGCTGCAAGCGATGCAATTGAtacaatgataaaattattgatctCCACGAAGGAAGAAACTCAGGCAAAGTCTGCATCAGCTCTGGCaggaatttttgaaataaggaaagacTTGCGTGAAAGCAGCATTGCTGTTAAGGCTCTTTGTTCAGCCATGGAATTGCTAAATGTTGACTCTGAAAGTATCCTAATGGAGTCATCACGCTGCCTGGCTGCaatatttctttctatcaAAGAGAACAGGGATGTAGCTGCTGTTGCTAGAGATGCATTATCCCCCTTAGTTGTTCTAGCTAACTCTTCCATTTTGGAAGTTGCAGAGTTGGCGACATGTGCTGTGGCAAATCTTATTTTGGATGGTGAAATTTCAGAGAAAGCTATTGTGGAAGAGGTTATATTACCTGCTACCAGAGTGTTAAGTGAAGGCACAATTTCTGGAAAAACCCATGCTGCAGCTGCAATTGCTCGCCTGTTGTGTTCTCGGCGAGTTGATTATGCTGTAACTGATTGTGTAAATCGTGCTGGCACTGTTCTTGCTTTAGTTTCTTTCCTAGATGCTGCTATTAGTGGAGATGTTGGCACATCAGAGGCTTTAGAAGCACTTGCTATTCTGTCTAGGTCAGAAGAGACCGGTGCAGCAGATGTCAAACCTGCATGGGCAGTATTGGCTGAATTCCCTAAAAGCATAAGTCCAATTGTCCTGTCTATTGCTGATTCAACACCAATATTTCAGGATAAAGCTATCCAGATATTATCTCGATTATGCAAGGATCAACCTGTTGTTTTAGGAGAGATTGTTGCTACTGCCTCTGGATCTATATTATCTTCAATAGCCAAGAGGATAGTCGGTTCCACAAATGTTAAGGTCAAAATTGGGGGAGCTGCACTACTCATTTGTGCTGCAAAAGTAAATCACCAGATATTGGTGGAAGATCTGAATCAATCAAACTTGTGTGCTGATCTTATCCAGTCTCTTGTTATGCTTGTTTCTGCAGAGGCTTCTTTGGGTAATCAGGGTGCTGATAGTGAGGAATACATCAGCATTTGCAGGAATGCAAAAGCAGCCGATGGTGGTCAATCTCTTACAGGCACGGCCATTATATATGGTACCAACTTAGCTATATGGTTACTGTCTCTTCTTGCTTGTCACgatgaaaaaagtaaaactgcAATTATGGAGGTTGGAGCAATTGAGGTTCTCACTGACAGGATCTCAAACTGTTTCTCACAATATACACAGATGGACTATAAAGAAGATAGCAGCATGTGGATTTGTGCTTTGTTGTTGGCAATATTATTTCAAGATAGAGATATCATACGAGCACATGCAACCATGAAATCTATATCAGCacttacaaatttattgaaatcaGAGGAATCAGCGAATAGATACTTTGCTGCACAATCAATAGCTAGCCTAGTCTGTAATGGTAGCAGGGGAACACTTCTGTCTGTTGCAAATTCTGGTGCAGCTGGTGGCCTTATCTCCTTGCTTGGTTGTGCTGATACTGATATACAGGATTTGCTGGATTTGTCAGAGGAATTCCATTTGGTGCGTTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTTAGAGTTGATGACATAAGGGTTGGTGCCACTTCTCGGAAGGCAATGCCTGCTCTGGTTGACCTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCATTTTTAGCACTTGGGCTTCTGACTCAGCTTGCTAGAGATTGCCCATCCAATAAGATTGTAATGGTAGAGTCTGGGGCCTTGGAGGCACTTACTAAGTATCTTTCACTGGGTCCACAAGATGCAACTGAGGAAGCTGCTACTGATCTATTAGGAAATTTGTTTAGCAGTGCTGAGATACGGAGACATGAGTCGGCATTTGGTGCTGTTACTCAACTTGTAGCTGTCTTGCGCTTAGGTGGAAGAGGTGCGAGGTATAGTGCTGCAAAAGCCTTAGAAACTTTGTTCTCTGCTGACCACATCAGGAATGCAGAGACTGCTCGACAAGCTGTTCAACCATTGGTGGAGATTCTAAATACTGGTTTAGAGAGGGAGCAACATGCTGCAATCGCTGCATTGGTTAGGCTACTTAGTGAAAATCCATCAAGGGCACTTGCTGTTGCAGATGTTGAAGTGAATGCAGTGGATGTACTATGCAGGATCCTTTCATCAAATTGTTCAATGGACCTCAAAGGGGATGCCGCTGAATTATGTTGTGTTCTTTTTGGGAATACAAGGATCAGATCCACAGTGGCTGCTGCACGCTGTGTTGAACCTCTAGTCTCTCTCCTTGTTGTTGAGTTTAGTCCTGCTCAACATTCAGTTGTCCGTGCATTGGATAGGCTTGTTGATGATGAACAACTGGCAGAACTAGTTGCTGCACATGGTGCAGTAATTCCTCTGGTTGGCCTACTCTATGGTAAAAATTATGTGCTTCATGATGCCATTTCCAGAGCTCTTGTCAAGTTAGGGAAAGATAGACCTGCTTGTAAAATGGAAATAGTGAAAGCTGGGGTTATTGAAAGCATACTTGACATCCTTCATGAAGCACCGGACTATCTATGTGCAGCTTTTGCAGAATTGCTGCGTATTTTGACCAATAATGCTAGCATAGCTAAAGGACCATCTGCTGCTAAAGTGGTTGAACCTCTATTTTTGTTGCTGACAAGACAAGAATTTGGGCCTGATGGAAAGCATAGTGCATTGCAGGTTTTAGTTAATATCTTAGAACATCCTCAATGTCGTGCAGACTATACATTGACCTCTCACCAAGCTATTGAACCACTTATCCCCTTACTTGATTCTCCAATATCAGCGGTGCAACAGTTGGCTGCTGAACTTCTCTCGCATCTACTTTTGGAAGAACACCTTCAGAAGGATCCATTGACACAACAAGTAATTGGCCCTCTTATACGAGTTCTTGGTTCTGGTATACACATATTGAAGCAGAGAGCTGTGAAGGCCCTTGTCAGTATTGCACTAACATGGCCAAATGAAATTGCAAAAGAAGGTGGTGTTATCGAAATTTCCAAAGTAATACTGCAAGCTGATCCTTCCCTTCCTCATGCTTTATGGGAGTCTGCTGCCTCTGTTGTGGGAAGTATCCTGCAATTTAGTTCTGAGTTCTACTTGGAAGTGCCTGTTGCTGTCTTGGTAAGGTTGCTTCGGTCTGGCTCAGAGAGCACAGTTATTGGTGCATTAAATGCTCTTCTAGTATTGGAAAGTGATGATGGAACTAGTGCAGAAGCTATGGCTGAAAGTGGTGCCATAGAGGCTCTCTTGGAACTTCTACGGTCTCATCAGTGCGAAGAAACTGCTGCAAGGCTCTTGGAAGTATTGCTGAACAATGTAAAGATCCGAGAAACAAAAGCTATTAAATCAGCCATCTTACCATTGTCCCAATACCTCTTGGATCCACAGACCCAAGCACAGCAACCAAGGTTACTGGCAACTTTGGCTCTTGGTGATCTGTTCCAGAATGAGGGTCTTGCCCGGACAGCTGATGCAGTTTCAGCCTGCCGTGCTTTAGTAAATGTGCTTGAAGAACAGCCGACTGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAAAACCTTGTAATGTACAGTCGATCAAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTTCAGGTTGTATTGGATCTGATAGGTTCAAGTGATCCAGAAACATCTCTTCAGGCTGCAATGTTTGTTAAACTTCTCTTCTCTAATCATACCATTCAAGAGTATGCTTCTAGTGAAACTGTCAGAGCAATAACTGCTGCTATTGAAAAGGATTTATGGGCGACTGGAACGGTGAATGATGAGTATCTGAAAGCCCTGAATTCTCTTTTTAGCAACTTCCCACGACTGAGAGCAACAGAGCCAGCTACACTTAGCATACCCCATCTGGTTACATCCTTAAAGACAGGTTCAGAGTCCACTCAAGAAGCTGCCTTGGATGCACTTTTTCTTCTCCGGCAAGCTTGGTCCGCATGCCCAGCAGATATTTCAAGAGCTCAGTCCACAGCAGCTGCAGATGCTATTCCTTTGCTGCAGTACTTAATCCAGTCTGGCCCACCTCGCTTCCAGGAGAAGgcagaatttttattacaGTGTTTGCCAGGGACATTGGTCGTGATCATCAAGCGCGGGAACAATATGAAGCAATCAGTTGGAAACCCTAGTGTTTATTGTAAGCTTACCCTTGGCAATACCCCTCCAAGGCAAACCAAGGTGGTCTCAACTGGCCCTAATCCAGAGTGGGATGAGAGCTTCTCATGGTCATTTGAGAGTCCTCCAAAAGGCCAAAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTTCATTTGGAAAAGTAACAATCCAGATTGATCGGGTTGTGATGCTAGGAGCGGTAGCCGGAGAGTATACTCTATTGCCAGAAAGTAAAAGTCGCCCCTCAAGGAATCTAGAAATAGAATTCCAGTGGTCGAACAAGTG 6455 0.429 MATSVAWRYSPSNGSSHAANNLERNGEGKTHDSETPTPHSVLKMGLRERNSSMEDPEGTLASVAQCIEQLRQSSSSAQEKEYSLRQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAAAVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIYAVSQGGAKDHVGSKIFSTEGVVPVLWEQLEKGMKTGNVVVSLLTGALKNLSSSTEGFWNLTIQAGGVDILVKLLTTGESNNLANVCFLLACMMMEDASLCSKVLAAEATKQLLKLLGPGNDAPVRAEAAGALESLSAQCKEARWEIANSNGIPALINATIAPSKEFMQGEYAQALQENAMCALANISGGLSYVISSLGQSLESCTSPAQIADTLGALASALMIYDSKAESTRASDPLAVEQTLLKQFKPRLPFLVQERTIEALASLYGNPILSIKLANSDAKRLLVGLITMATNEVQDELIKALLTLCNNEDSLWRALLGREGVQLLISLLGLSSEQQQECAVSLLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAKEDSALILGNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTNDQPESKVYVLDALKSMLSVVPFSDILREGSAASDAIDTMIKLLISTKEETQAKSASALAGIFEIRKDLRESSIAVKALCSAMELLNVDSESILMESSRCLAAIFLSIKENRDVAAVARDALSPLVVLANSSILEVAELATCAVANLILDGEISEKAIVEEVILPATRVLSEGTISGKTHAAAAIARLLCSRRVDYAVTDCVNRAGTVLALVSFLDAAISGDVGTSEALEALAILSRSEETGAADVKPAWAVLAEFPKSISPIVLSIADSTPIFQDKAIQILSRLCKDQPVVLGEIVATASGSILSSIAKRIVGSTNVKVKIGGAALLICAAKVNHQILVEDLNQSNLCADLIQSLVMLVSAEASLGNQGADSEEYISICRNAKAADGGQSLTGTAIIYGTNLAIWLLSLLACHDEKSKTAIMEVGAIEVLTDRISNCFSQYTQMDYKEDSSMWICALLLAILFQDRDIIRAHATMKSISALTNLLKSEESANRYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLDLSEEFHLVRYPDQVALERLFRVDDIRVGATSRKAMPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGNLFSSAEIRRHESAFGAVTQLVAVLRLGGRGARYSAAKALETLFSADHIRNAETARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEVNAVDVLCRILSSNCSMDLKGDAAELCCVLFGNTRIRSTVAAARCVEPLVSLLVVEFSPAQHSVVRALDRLVDDEQLAELVAAHGAVIPLVGLLYGKNYVLHDAISRALVKLGKDRPACKMEIVKAGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFLLLTRQEFGPDGKHSALQVLVNILEHPQCRADYTLTSHQAIEPLIPLLDSPISAVQQLAAELLSHLLLEEHLQKDPLTQQVIGPLIRVLGSGIHILKQRAVKALVSIALTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVVGSILQFSSEFYLEVPVAVLVRLLRSGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKAIKSAILPLSQYLLDPQTQAQQPRLLATLALGDLFQNEGLARTADAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSLQAAMFVKLLFSNHTIQEYASSETVRAITAAIEKDLWATGTVNDEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSESTQEAALDALFLLRQAWSACPADISRAQSTAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTKVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGAVAGEYTLLPESKSRPSRNLEIEFQWSNK 2151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01658 2151 SUPERFAMILY ARM repeat 1366 1654 IPR016024 -
Bva05g01658 2151 SUPERFAMILY ARM repeat 63 293 IPR016024 -
Bva05g01658 2151 SUPERFAMILY ARM repeat 1178 1363 IPR016024 -
Bva05g01658 2151 Gene3D - 48 414 IPR011989 -
Bva05g01658 2151 Gene3D - 1815 2028 IPR011989 -
Bva05g01658 2151 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 19 2151 - -
Bva05g01658 2151 Gene3D - 415 646 IPR011989 -
Bva05g01658 2151 MobiDBLite consensus disorder prediction 1 23 - -
Bva05g01658 2151 Pfam C2 domain 2030 2121 IPR000008 -
Bva05g01658 2151 Gene3D C2 domain 2029 2151 IPR035892 -
Bva05g01658 2151 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 19 2151 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Bva05g01658 2151 SUPERFAMILY ARM repeat 579 1520 IPR016024 -
Bva05g01658 2151 MobiDBLite consensus disorder prediction 1 41 - -
Bva05g01658 2151 Gene3D - 1700 1808 IPR011989 -
Bva05g01658 2151 SUPERFAMILY ARM repeat 217 609 IPR016024 -
Bva05g01658 2151 Gene3D - 819 1172 IPR011989 -
Bva05g01658 2151 SMART arm_5 1730 1769 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 817 859 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 311 360 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 484 523 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 136 176 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 1481 1521 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 1439 1479 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 94 135 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 733 771 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 1857 1897 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 268 309 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 1566 1607 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 567 607 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 1398 1438 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 525 565 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 1184 1227 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 1229 1270 IPR000225 GO:0005515
Bva05g01658 2151 SMART arm_5 1311 1352 IPR000225 GO:0005515
Bva05g01658 2151 Pfam Armadillo/beta-catenin-like repeat 525 564 IPR000225 GO:0005515
Bva05g01658 2151 Pfam Armadillo/beta-catenin-like repeat 104 134 IPR000225 GO:0005515
Bva05g01658 2151 Gene3D - 1523 1699 IPR011989 -
Bva05g01658 2151 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2029 2148 IPR035892 -
Bva05g01658 2151 CDD C2 2032 2122 - -
Bva05g01658 2151 Gene3D - 1175 1296 IPR011989 -
Bva05g01658 2151 Gene3D - 1297 1424 IPR011989 -
Bva05g01658 2151 ProSiteProfiles C2 domain profile. 2011 2128 IPR000008 -
Bva05g01658 2151 SUPERFAMILY ARM repeat 1580 1982 IPR016024 -
Bva05g01658 2151 Gene3D - 647 796 IPR011989 -
Bva05g01658 2151 Gene3D - 1425 1520 IPR011989 -
Bva05g01658 2151 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1196 1240 IPR000225 GO:0005515
Bva05g01658 2151 SMART C2_3c 2031 2127 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01658 Bva-Chr5 13411659 13421177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01658 488 620 U-box Gene Family AT2G23140 40.741 1.23e-12 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01658 - - gmx:100816765 3618.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01658 05 13411659 13421177 Bva05g01658 05 13411659 13421177 ECH