Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01653 ATGACAGCAATCTCTGAGCTTTTCTCAAAGCTCTACACCAAAACCATGGTGGTTCTTACTCTTCTCCTTGTAGAACTCGTTCTTCTTATCCAACACCTCAAGTCGGATACCCGACTGATTACCCCGACCCAATATCTCAAATTGATCGAAGAGAAGAACCCGACAATTCGATTCACCAAGAGGTTGAAGCAGCCGGAGAACATGGAGTGCAGGGTTTGCTTGTCGGAATTCGAGGAAGGTGAGAAAGTTAGGAACTTGAAATGCAAGCACACGTTTCATAAGGATTGCTTGGATAAGTGGCTGCAACAGTGTTGGGCTACTTGCCCACTCTGCAGAAACCAAGTGCTGCCGGAAAATGTTGTCGCCAAGTATCGCCGGCTTCAGAATCAGACGGAAAATGATGATGCGAATCATGATGATCAGATTATGGTCTTGTTATCTGGATTACGAGGTGGTGCGGCTTTCAGCAATCACTCCTG 479 0.4635 MTAISELFSKLYTKTMVVLTLLLVELVLLIQHLKSDTRLITPTQYLKLIEEKNPTIRFTKRLKQPENMECRVCLSEFEEGEKVRNLKCKHTFHKDCLDKWLQQCWATCPLCRNQVLPENVVAKYRRLQNQTENDDANHDDQIMVLLSGLRGGAAFSNHS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01653 159 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 152 - -
Bva05g01653 159 Pfam Ring finger domain 69 112 IPR001841 -
Bva05g01653 159 SUPERFAMILY RING/U-box 53 118 - -
Bva05g01653 159 ProSiteProfiles Zinc finger RING-type profile. 70 112 IPR001841 -
Bva05g01653 159 PANTHER - 1 152 - -
Bva05g01653 159 SMART ring_2 70 111 IPR001841 -
Bva05g01653 159 CDD mRING-H2-C3H2C2D_ZSWM2 69 112 - -
Bva05g01653 159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 119 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01653 Bva-Chr5 13385328 13386017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01653 36 119 C3H Transcription Factor Family AT2G04240 43.182 1.41e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01653 K16282 - gmx:102669811 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01653 05 13385328 13386017 Bva05g01653 05 13385328 13386017 ECH