Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01623 ATGGACTACTGTTTTgcaaaccctaaaccttatcCTAATTATGTACACTCTGCCGGAGACATGCCGCCGGCGGCTTCTGACTTTGTAGTATCCGATTATCTGATGCTCGATGGCGGCGGCGATGCTGATCATCATCGAGAGTCTTGGTCACAGAGCACAGAATCATCGGAGAAGGCAGTCCGTGAAGCCAGTGTTGGTGCAACTGCAACTTCAGAGAATAATAACCCCATAAATAAATGCGAAACTGGGGCTAAGCGAACGAAGATAGAAGCGACCCCAAGAATTGCATTCCGAACCAGATCAGAGGTCGAGGTTATGGATGATGGATACAAATGGAGGAAGTACGGAAAGAAGTCGGTGAAGAATAGTCCGAATCCAagGAACTATTACAAATGTTCAAGTGGAGGATGCAACGTGAAGAAAAGAGTAGAAAGGGACAGAGATGACTCAAATTATGTGATAACAACTTATGAAGCAGTACACAATCATGAGAGCCCAGCTGCTGCCTACTACACCCAAATGTCTTTCTCCTTGCTGCATCAAAATGCTTGGCCTTTGCAGCAACCTGCAGCAAATTCCTCTTTATCTTCCTA 593 0.4401 MDYCFANPKPYPNYVHSAGDMPPAASDFVVSDYLMLDGGGDADHHRESWSQSTESSEKAVREASVGATATSENNNPINKCETGAKRTKIEATPRIAFRTRSEVEVMDDGYKWRKYGKKSVKNSPNPRNYYKCSSGGCNVKKRVERDRDDSNYVITTYEAVHNHESPAAAYYTQMSFSLLHQNAWPLQQPAANSSLSS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01623 197 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 20 171 IPR044810 GO:0003700
Bva05g01623 197 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 20 171 - -
Bva05g01623 197 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g01623 197 SUPERFAMILY WRKY DNA-binding domain 98 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g01623 197 Pfam WRKY DNA -binding domain 107 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g01623 197 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g01623 197 Gene3D WRKY domain 90 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g01623 197 MobiDBLite consensus disorder prediction 41 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01623 Bva-Chr5 13189332 13191497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01623 7 182 WRKY Transcription Factor Family AT5G64810 48.066 3.36e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva05g01623 WRKY 9.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01623 - - gmx:100127396 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01623 05 13189332 13191497 Bva05g01623 05 13189332 13191497 ECH