Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01616 ATGTCTGTGCGACTTACGTTAGGGTTTATAGGGGTTAAGGGCTGGGATTCAGTGACTTCTGTCCGAGAAAAAGCGAGAAAACGAACTTGTACTAGCACTTTCACTCTTCAACTTGGCAATAATTCGACCTTGATGGGTCCCTTAATGCTGCCCATTATTGCGAAAGGCTCTTCCATATCATCAGCAGATGCTtgtaccaagaaaaaaaagaactcaTTGACAAGAAATTCTTTTGCAGCAATTAgcacaagagaagaaaaacccTTCGACTTCTTACGTATCTTATTTGAGGGTTTTATTGCTGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTGTATCCCATTGACACTATAAAGACTCGCCTGCAGGCTGCTCGTGgaggagaaaaattaatattgaaaggCCTTTATTCTGGATTGGCAGGAAATCTTGCTGGTGTTTTACCGGCATCCGCTCTGTTTGTCGGAGTCTATGAACCTATAAAGCAGAAACTATTGAGGATGTTCCCTGAAAATTTGAGTGCTTTTGCTCATTTGACTGCAGGCGCCATAGGGGGCATTGCTGCTTCACTGATTCGTGTGCCAACAGAGGTTGTTAAGCAACGAATGCAGACTGGGCAATTCACTTCAGCTTCTAATGCTGTCCGCTTTATTGCTACTAAGGAGGGCTTTAGAGGACTTTATGCCGGTTATGGATCTTTTTTATTGCGGGATTTGCCCTTTGATGCTATTCAGTTTTGCATCTATGAGCAGCTTCGGCTAGGTTATATGCTAGCGGCACGGAGAAATCTGAATGATCCAGAAAATGCTGTTATTGGTGCTTTTGCTGGTGCACTGACTGGAGCTATAACTACTCCCCTTGATGTCATTAAGACAAGGTTAATGGTTCAGGGATCTACAAATCAATACAAGGGAATCATAGATTGTGTTCAAACTATTTTAAAGGAAGAGGGACCACGTGCTTTTACGAAGGGTATTGGTCCAAGAGTGCTATGGATAGGCATTGGTGGTTCAATCTTCTTTGGCGTTCTGGAAAGTACAAAGCGTTTTCTAGCTGAGAGGCGTCCTGCACTCACTGAGCATTCAGACCCAAAgcaagagta 1106 0.4078 MSVRLTLGFIGVKGWDSVTSVREKARKRTCTSTFTLQLGNNSTLMGPLMLPIIAKGSSISSADACTKKKKNSLTRNSFAAISTREEKPFDFLRILFEGFIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRMFPENLSAFAHLTAGAIGGIAASLIRVPTEVVKQRMQTGQFTSASNAVRFIATKEGFRGLYAGYGSFLLRDLPFDAIQFCIYEQLRLGYMLAARRNLNDPENAVIGAFAGALTGAITTPLDVIKTRLMVQGSTNQYKGIIDCVQTILKEEGPRAFTKGIGPRVLWIGIGGSIFFGVLESTKRFLAERRPALTEHSDPKQE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01616 368 PRINTS Mitochondrial carrier protein signature 229 247 IPR002067 GO:0055085
Bva05g01616 368 PRINTS Mitochondrial carrier protein signature 274 296 IPR002067 GO:0055085
Bva05g01616 368 PRINTS Mitochondrial carrier protein signature 98 111 IPR002067 GO:0055085
Bva05g01616 368 PRINTS Mitochondrial carrier protein signature 111 125 IPR002067 GO:0055085
Bva05g01616 368 SUPERFAMILY Mitochondrial carrier 97 346 IPR023395 -
Bva05g01616 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 351 IPR018108 -
Bva05g01616 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 93 165 IPR018108 -
Bva05g01616 368 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 50 361 - -
Bva05g01616 368 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 50 361 - -
Bva05g01616 368 Pfam Mitochondrial carrier protein 269 354 IPR018108 -
Bva05g01616 368 Pfam Mitochondrial carrier protein 174 255 IPR018108 -
Bva05g01616 368 Pfam Mitochondrial carrier protein 96 129 IPR018108 -
Bva05g01616 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 256 IPR018108 -
Bva05g01616 368 Gene3D Mitochondrial carrier domain 96 363 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01616 Bva-Chr5 13141445 13150964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01616 172 357 Chloroplast and Mitochondria Gene Families AT1G07030 31.414 4.16e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01616 K15111 - gmx:100811130 543.117