Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01611 ATGGGATGCTTTTTTTCCTCCTCGCACTCAAAGTCACCCTCTCGCAGAAACTTAGAGAggtcaaagaaaggaaatgggGATGTCAAGAGAAATAGTAGAGGCAGCGGACCCATCAACCATAAAAAGTTGATAACAAGTTCCCATAAGCAGCTTCGGAGTGGTCATAAGATATCGAGTACTAGTACTGTGAATGCAAAAGCTAGTGGTGCTGCTCTAGTAGCAAAAGGAGCAAGGGGAGGAGAATTTGAAACGGAAAAGAACCAGGTCGGCAATATTTCAAAGAGATTTGTGGAGAAGAAGATTGGAAGAGATGAATTTGTGGATGGATGGCCAAAGTGGCTGGTTGATAATATCCCTACGAACGTTTTGGCTGGTCTTATTCCCAAGAGCGCTGATTCCTATGAAAAACTCGCCAAGGTAGGACGTGGAACATACAGCAATGTATACAAAGCTCGAGATAAGGAGAGTGGAAAAATTGTTGCTTTGAAGAAGGTACGGTTTGACACATCAGATTCTGAAAGCATCAAGTTTATGGCAAGAGAGATCACGATACTGCAGACGCTGGACCATCCCAATATCATCAAGCTTGAAGGAATAGCAACATCAAGGATGCAATATAGTCTTTATCTAGTTTTTGATTTCATGCAGGCGGACCTAGCCAGAATTATCTCCCGCCCCGGCGAGAGACTCACTGAACCGCAGaTCAAGTGCTACATGCAGCAACTGCTTGCTGGCCTCCAGCACTGCTATGAGAGGGGAGTTATGCATCGTGATATTAAACCTTCCAACTTGTTAATAGACAAACAAGGGGTGCTGAAAATTGGAGATTTTGGCCTTGCAAATTCTCTTGTTAAGCCCAAAGGACCTCTCACAAATCGGGTGGTGACACTCTGGTATAGAGCTCCTGAACTGCTTTTAGGTTCAACAGATTATGGGTTTGGCATTGATCTCTGGAGTGCAGGATGCCTATTGGCTGAGATGTTTACCGGTAGGCCAATTATGCCCGGGAGGACAGAGGTTGAACAGCTTCACATGATCTTCAAACTTTGCGGTTCTCCTTCGGAGGATTACTGgaagaaattaaagttaatgACAAGCTACCGTCCACCACAACGTTACAAACCTAATTATGAAGAAACTTTCCCGGATTTTCCGTCCTCTTCTCTTGGCCTCCTGACCAAACTTCTTGCTCTGGACCCTACCCATCGCGGCAGTGCTGCATCTGCTCTCAAAAGTGAATTCTTCAAAACTCCCCCGTTAGGATGTGCCCTCTCAGTGTTACCAGTAATCTCCAAAGATGATGATGAGCAGTCACAAATTAAAAGACGCAAAAGGCCCAAGATGATTAAAAAAGACCCAAGATTTCAAACAGGTCGTGTGGGTCATGAGCAGAGTCAAACTGCAGAAAAACTTAGAGGAGATTCTGAATTGTCCAAAGAAGAGAAGAGTATGGAACCTAACATGCTTAGCAAAGAAATGAGCACTAGCGTAAGCAGCACATCATCGGGCTCAAAACTATATATGAACGAAGGGAATATCAAGGCATCTCTTTCTCCAGTTGTTGTGTCTGGTCCCAGAACAGAGGCTCATCCTAATGCTCTTAAGAACATTAAGAACTATGCGCTCTTACAACCCTGTATAATAGATATGATCAATCGTAAGGAAGGCAATGGATTTGTTCAGGCTCGCAGGTCCTTTTCTGCATCGGATTTTCATCTTGATCCAGAAAAGTTATCGAATTTCTATGGAATGGATAAAAAAGTGGTGCATCGAATTTG 1778 0.4297 MGCFFSSSHSKSPSRRNLERSKKGNGDVKRNSRGSGPINHKKLITSSHKQLRSGHKISSTSTVNAKASGAALVAKGARGGEFETEKNQVGNISKRFVEKKIGRDEFVDGWPKWLVDNIPTNVLAGLIPKSADSYEKLAKVGRGTYSNVYKARDKESGKIVALKKVRFDTSDSESIKFMAREITILQTLDHPNIIKLEGIATSRMQYSLYLVFDFMQADLARIISRPGERLTEPQIKCYMQQLLAGLQHCYERGVMHRDIKPSNLLIDKQGVLKIGDFGLANSLVKPKGPLTNRVVTLWYRAPELLLGSTDYGFGIDLWSAGCLLAEMFTGRPIMPGRTEVEQLHMIFKLCGSPSEDYWKKLKLMTSYRPPQRYKPNYEETFPDFPSSSLGLLTKLLALDPTHRGSAASALKSEFFKTPPLGCALSVLPVISKDDDEQSQIKRRKRYPNRPKMIKKDPRFQTGRVGHEQSQTAEKLRGDSELSKEVRLYTLLNTLYSLVSFDGYRRRKFWLCFLLELLCLDFKSLC 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01611 525 MobiDBLite consensus disorder prediction 1 62 - -
Bva05g01611 525 Gene3D Transferase(Phosphotransferase) domain 1 217 454 - -
Bva05g01611 525 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Bva05g01611 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Bva05g01611 525 SMART serkin_6 134 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01611 525 PANTHER CYCLIN-DEPENDENT KINASE 82 484 - -
Bva05g01611 525 Gene3D Phosphorylase Kinase; domain 1 124 216 - -
Bva05g01611 525 SUPERFAMILY Protein kinase-like (PK-like) 129 418 IPR011009 -
Bva05g01611 525 ProSiteProfiles Protein kinase domain profile. 134 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01611 525 Pfam Protein kinase domain 134 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01611 525 PANTHER CELL DIVISION PROTEIN KINASE 82 484 - -
Bva05g01611 525 MobiDBLite consensus disorder prediction 451 477 - -
Bva05g01611 525 MobiDBLite consensus disorder prediction 38 62 - -
Bva05g01611 525 MobiDBLite consensus disorder prediction 13 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01611 Bva-Chr5 13096900 13100954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01611 129 448 Core Cell Cycle Gene Families AT5G10270 46.313 3.01e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva05g01611 Pkinase 1.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01611 K08819 - pop:7456281 600.127