Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01592 ATGTTGGAATTCTCAAGTTTACCGGAAAATTCCCCTGCCTCTATTGAAAAACGGGCGGTAGAGCAGGAGGAGGATGCAAGAGGAACGGTATCTGATGGGTTCAAAGAGGAAGAGGGAATTTCCGGCGAAGTGGGTGACCGGAATGCCACCGCTAACAGGTGGCCTCGAGAGGAGACAATGGCTTTGCTCAAAATAAGGTCTGAAATGGACGTTGCTTTCAGAGATGCAAGCACCAAAGCTCATCTTTGGGAACAAGTTTCAAGGAGATTAGCTGAGCTAGGTTATAATAGGACTGCCAAGAAATGcaaggagaagtttgagaacatcAACAAATACCACAGAAGGATCAAGGAAGGACGCCATGGCCGACCCAAGGGCAAGAGTTATCGGTTTTTTGAGCAATTGGAAGCTCTAGACACCCACCCAGTACTTCCTCCCCCTTCCCCAGAGAAGAACCAAGAACACGTGGCAGCTACAGCAAAAATAACAGCCACAAAGGATCCACCAAACGCTATTCAAGATGCAGTACCATTTTCCATCAGATTCCCCGGTGCAAGTATGTTTAACCACTCTAGTTCAACCACTTCTTCTTCCAGCAAGGAATCAGAGCAAGGTATgcgaaaaaagaagaggaagcttATGGAGTTTCTTAATGGATTGATGAAGCAAGTAATAGAGAAGCAAGAGGCCCTACAGAACAAATTAATGGAGGTGTTAGAAAAATGTGAACAAGACCGATTGGCGAGAGAGGAAGCTTGGAAGATGCAAGAATTAGATCGAATCAAGAGGGAGCGTAAGCTTCTGGCTCAAGAAAGATCAATTGCTGCGGCAAGGGATGCTGCAGTGCTTGCCTTTCTGAATAAATTCACAGAACAAGTGGGTCCGGTGCAATTGCCCGATAAGATTCTGGTTGATAACGCAATTCCAGATGATAATGATAAGGATCACCAAGAAAATGTAAATGGAGGCAGTATTGCAAATCAGCAAGAATTTACAAATGGTGGGAATTTCATACAGATGAGCTCCTCAAGGTGGCCTAAAGAAGAAGTTGAAGCTTTGATTAGATTGAGGACAAACCTTGATCTGCAGTATCAAGGGAATGTACCTAAAGGACCTCTTTGGGAAGATATATCCTCTGGAATGAAAAAGCTTGGCTATGATCGCAGTGCCAAGAGATGCAAAGAGAAATGGgagaatataaacaaatatttcaagaggatgaaagaaaagaataggaCAAGGCCTGAGGATTCCAAGACTTGTCCTTATTATGAGCAGCTGGAAGATTTGTACAAGAAAAGGCCTAGGAAGGTTCAGGAATCAGCTGGTTCTGGTAACAAGTTGAAACCGGAGGAGCTATTAATGCGTATTACGGATGGTCAAGATGAACGACAGCAGCTTGAGTCATCATTTGAGGATGCTGATAGAGATAATACAGATCAGAATGAATG 1451 0.4163 MLEFSSLPENSPASIEKRAVEQEEDARGTVSDGFKEEEGISGEVGDRNATANRWPREETMALLKIRSEMDVAFRDASTKAHLWEQVSRRLAELGYNRTAKKCKEKFENINKYHRRIKEGRHGRPKGKSYRFFEQLEALDTHPVLPPPSPEKNQEHVAATAKITATKDPPNAIQDAVPFSIRFPGASMFNHSSSTTSSSSKESEQGMRKKKRKLMEFLNGLMKQVIEKQEALQNKLMEVLEKCEQDRLAREEAWKMQELDRIKRERKLLAQERSIAAARDAAVLAFLNKFTEQVGPVQLPDKILVDNAIPDDNDKDHQENVNGGSIANQQEFTNGGNFIQMSSSRWPKEEVEALIRLRTNLDLQYQGNVPKGPLWEDISSGMKKLGYDRSAKRCKEKWENINKYFKRMKEKNRTRPEDSKTCPYYEQLEDLYKKRPRKVQESAGSGNKLKPEELLMRITDGQDERQQLESSFEDADRDNTDQNE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01592 483 CDD GT1 52 117 - -
Bva05g01592 483 ProSiteProfiles Myb-like domain profile. 46 110 IPR001005 -
Bva05g01592 483 Pfam Myb/SANT-like DNA-binding domain 343 430 IPR044822 -
Bva05g01592 483 Pfam Myb/SANT-like DNA-binding domain 52 138 IPR044822 -
Bva05g01592 483 Gene3D - 345 406 - -
Bva05g01592 483 Gene3D - 54 115 - -
Bva05g01592 483 SUPERFAMILY Homeodomain-like 342 427 IPR009057 -
Bva05g01592 483 Coils Coil 464 483 - -
Bva05g01592 483 MobiDBLite consensus disorder prediction 187 201 - -
Bva05g01592 483 MobiDBLite consensus disorder prediction 1 55 - -
Bva05g01592 483 Coils Coil 214 245 - -
Bva05g01592 483 MobiDBLite consensus disorder prediction 187 208 - -
Bva05g01592 483 MobiDBLite consensus disorder prediction 452 483 - -
Bva05g01592 483 ProSiteProfiles Myb-like domain profile. 343 401 IPR001005 -
Bva05g01592 483 MobiDBLite consensus disorder prediction 16 43 - -
Bva05g01592 483 MobiDBLite consensus disorder prediction 434 483 - -
Bva05g01592 483 CDD GT1 343 408 - -
Bva05g01592 483 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 1 482 - -
Bva05g01592 483 PANTHER - 1 482 - -
Bva05g01592 483 SMART sant 341 403 IPR001005 -
Bva05g01592 483 SMART sant 50 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01592 Bva-Chr5 12982546 12984828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01592 40 434 Trihelix Transcription Factor Family AT1G76880 44.789 1.24e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva05g01592 Myb_DNA-bind_4 5.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01592 - - qlo:115994903 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01592 05 12982546 12984828 Bva05g01592 05 12982546 12984828 ECH