Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01586 ATGGCGACCATGAGCTCTAGCGTCCTGGCTTGTAGCTACGCCATATCAGGCGCGGCATCTTCTGATCTGAATGGGAAGCTTACTAGCATTCCTTCAGTTTCAGTTTCAGTTTCGGGTCACAAGTCGGCGGTGATCAAAGCCCAACAGCAAGAGACCAAAGTTCCTCAGTCCAAAGAGGGAAGGAGAGCTGCACTTGCTTTATTGGCAGCCACCCTTGTGACCTCTGCAGCAGCTGCCTCCAATTCCTCTGCAAATGCTGGGGTTATAGACGAATACCTCGAGAAGAGCCAGGCCAACAAGGAATTGAATGACAAGAAGAGGTTGGCAACAAGTGGGGCAAACTTTGCTAGAGCATACACTGTGGAATTTGGTACTTGCAAATTCCCCGAGAACTTTACCGGTTGCCAAGATCTTGCCAAACAAAAGAAAGTGCCATTCCTCTCTGACGACTTGCAGCTTGAATGTGAAGGAAAGGATAAATACAAGTGTGGTTCTAATGTCTTCTGGAAATGGTG 515 0.4816 MATMSSSVLACSYAISGAASSDLNGKLTSIPSVSVSVSGHKSAVIKAQQQETKVPQSKEGRRAALALLAATLVTSAAAASNSSANAGVIDEYLEKSQANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFLSDDLQLECEGKDKYKCGSNVFWKW 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01586 171 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 46 171 IPR008796 GO:0009522|GO:0015979
Bva05g01586 171 Gene3D - 87 171 IPR044907 -
Bva05g01586 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01586 Bva-Chr5 12966458 12967403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01586 1 142 Calmodulin-binding Proteins AT5G64040 62.759 2.61e-54 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01586 K02701 - csv:101204396 253.832