Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01583 ATGTATCAATTCCATGAATGCAGCTCAGAAAATGCATTTGCTCCACTCCAACTCCAAGCAGATGATCTTGTATCTCTAAATAACATCCAAGAACTGATGATGGACGACCAAGAGTTTTTGGAAGGATTGGTCCAGCATCAGCCACATACAGAGATCTTAGAATTTGATTCCATGAATCATAATGACTCAATGGATGTGGAGACTGAATTGTCTGATAAAATTGTTGTTGGAGGCCAAGAAAATGGGCATATTGCGACGGAAGAGGATTCTTATTTGAAGGGAGTCCAAGAAGAGCTAATGGAAGAGAGCAGCTTAGCTGATCTCTTGCTGATAGGAGCTGAAGCTGTTGAAGCACAGAAGTTGGATCTTGCTTCCAACATAATTGAGAAGCTTAATTACTATGTCTTATCTTCAGAAAATGGAGATAGTTTATTGAACAGGTTGGCTCTTTTCTTTGCTCAAGGTCTTTATTGCAAAACCATAAATTCTCCTGAACAAATGCATTATGACCCGGTTCCTACACAGGCAAACGCTTTCTCTGCGTTTCAGATACTCCAGGAACTCTCTCCCTATGTAAAATTTGCCCATTTCACCGCCAACCAAGCTATCTTTGAAGCCACAGAGGGTGATGATGAGGTTCATGTCATTGATTTTGACATCATGGAAGGGATCCAATGGCCACCTTTGATGGTTGACCTTGCAATGAGGAAGCACACCTCCCTTAGAGTAACAGCCATCACTATGAACCAGCAAAGTGCAGCCTTTGTTCAACAAACGGGAAGAAGGCTTAAAGAGTTTGCTGCTTCtatcaattttccttttgtgttCGATCAGATAATGATAGACAGTGAAGAAGACATTCAAAAGATTCAAGTGGGCCATACAACGATAGTCAATTGTATGATACACCAGTGGATGCCTAACAGAAGTTTTTCATATgtcaaaacatttttagatGGTGCAAGTAAACTTTCACCTAAGCTTGTCGTTTTAGTAGAAGAAGAACTGTTCAATTTTTCTAGACTGAAATCAATGTCCTTCGTGGAATTCTTCAGTGAAGCTCTGCACCATTACACTATACTGTTTGATTCACTTTCAAGCAGTTGCTGGGGTGTTTACAAGATGGGGTTAGCCcagatagagaaagagattTTGGGATTCAGGATTATAGACAGTGTGAGGCAGTTCCCTTGTGAAAGTAAGGAAAGAGTGTTGTGGGAAGGAGGATTGTATTCCTTGAAGGGGTTCAAGAGGGTGCCTCTGAGTAGTTCTAATATTTCTCAAGCCAAGTTCTTGCTGAGCCTCTTTGGTGGAGGGTATTGGGTGCAGTACAACAAGTCTAGGTTGGCTTTGTGTTGGAAGTCAAGGCCTTTGACAGCAGCTTCGATTTGGGCaccaaaaacaatatttgaGTG 1415 0.3986 MYQFHECSSENAFAPLQLQADDLVSLNNIQELMMDDQEFLEGLVQHQPHTEILEFDSMNHNDSMDVETELSDKIVVGGQENGHIATEEDSYLKGVQEELMEESSLADLLLIGAEAVEAQKLDLASNIIEKLNYYVLSSENGDSLLNRLALFFAQGLYCKTINSPEQMHYDPVPTQANAFSAFQILQELSPYVKFAHFTANQAIFEATEGDDEVHVIDFDIMEGIQWPPLMVDLAMRKHTSLRVTAITMNQQSAAFVQQTGRRLKEFAASINFPFVFDQIMIDSEEDIQKIQVGHTTIVNCMIHQWMPNRSFSYVKTFLDGASKLSPKLVVLVEEELFNFSRLKSMSFVEFFSEALHHYTILFDSLSSSCWGVYKMGLAQIEKEILGFRIIDSVRQFPCESKERVLWEGGLYSLKGFKRVPLSSSNISQAKFLLSLFGGGYWVQYNKSRLALCWKSRPLTAASIWAPKTIFE 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01583 471 ProSiteProfiles GRAS family profile. 96 465 IPR005202 -
Bva05g01583 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 28 466 IPR005202 -
Bva05g01583 471 PANTHER OS12G0162700 PROTEIN 28 466 - -
Bva05g01583 471 Pfam GRAS domain family 106 464 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01583 Bva-Chr5 12948217 12949632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01583 105 464 GRAS Transcription Factor Family AT5G41920 34.771 7.78e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva05g01583 GRAS 1.1e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01583 - - gmx:100804613 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01583 05 12948217 12949632 Bva05g01583 05 12948217 12949632 ECH