Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01564 ATGCATGACCTAATAAGAGATATGGGCCGTGAAATCATTAGGCAAGTTTCACCCCTAGAACTTGGTAAGAGATCAAGGTTATGGTTCCATGAAGATGTTCTTGAAGTATTAATCCAAAATACGGGAAATGAGAACATTGAAGGAATATTGCTTGATTTGCCTAAACCGCAAGTAGTGCATTGGAGTGAGAAATTCCATCAGAGAATCTTGGCAAGAAATTGCAAGTCATTAACTTCAGAATCATCAAGCATATTATGGAGTCAGGCATTCAAAGAGGTCCACAGGTTACAAGTGAGAATGCCGGCAAAAAAATTTCCAGTATGGTTTGATCACAACAACAAAGGAGAAACTTTGTCCTTTTGGTTTCGTCAGAAATTCCCCATTGTTGCAGCAGCTTTTTCCTTTAGAAATTTGAATCAATTGGAGAATGAAATACTGTCTCAAAGTTCAGGAGTCAATCTTGATATCCATGTTTACATCAAATTTTCGAAGATTGAGTA 500 0.372 MHDLIRDMGREIIRQVSPLELGKRSRLWFHEDVLEVLIQNTGNENIEGILLDLPKPQVVHWSEKFHQRILARNCKSLTSESSSILWSQAFKEVHRLQVRMPAKKFPVWFDHNNKGETLSFWFRQKFPIVAAAFSFRNLNQLENEILSQSSGVNLDIHVYIKFSKIE 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01564 166 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 50 - -
Bva05g01564 166 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 50 IPR044974 GO:0006952
Bva05g01564 166 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 56 144 IPR044974 GO:0006952
Bva05g01564 166 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 56 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01564 Bva-Chr5 12843704 12844186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01564 1 53 WRKY Transcription Factor Family AT4G12020 47.170 2.74e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01564 - - gmx:100798893 92.4337