Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01561 ATGGCCAAAACAAAATTGGTTCCGGGATTTCGCTTTCATCCCACTGACGTTGAGCTGGTTAAGTACTATTTAAAGAGGAAGGTGATGGGCAAGAAATTTTCTGTAGATGTGATTGCAGAAGTCGATATATATAAGTATGTCCCGTGGGATCTCCCAGaTAAATCTATTCTGAGAACTGGGGATTTGGAATGGGATCTCACTGACAAAGGCATTCCTCAAGACTCCTACGTCCTCTGTAGGCTCTTCAAAAAGGATGGTCCTGGTCCTAGGAATGGTGCACAATATGGAAAACCatttaatgaagaaaactGGAATGATGATGACGAGGAAGTTGATTGTTCAGACTCTGATCCTTTAGTTGCTCTACCTGCCCCGTTTCCTGTGCTGCCTAGTGCACACGATAGCTCTATTGCAACTGACAGTCAGCTCCATGTGAGCGGATGCATTGTATCATCACCTTTGTCATGTCTATCAGGAGCAGTGCCTTCCCATCCTTCGGTTTCAAATGTTCAAGCACCTCCCCTCTGTATGATGCATCCTTCAGATTCAAGTGCTCAAGCTATTTCTGATGACGACACTCAAGTTCCAGTTGGTGATGATATTTTGTTGATGTCGGATTGTTTCCCAGCTGATAACACACCGGCattgaatgaaaataacaaaattgagAAGGTTAGTAATCCTGTTGAGGAAAATGATGCTGAAGGAGCACCGCATTTGgatataaatgatattttcaagGACTTGGGGGACATTGACAACTTTGCTGGATTGGGTGAAACTGGAAGTGATGAATTTACCGGAAACCAAATGCTTCCTTTGGATGATATGCCCCACTATCCAGACTTCTTAGAGTTGCATGACCTGGACTCTCCGATATTATGGCAAACTGAACACTATGAAAATCGGTGTCCACATGATCAAGGACCATCTGATCAAAGAAAGATGGATGGGAAAAAAGATTA 965 0.4145 MAKTKLVPGFRFHPTDVELVKYYLKRKVMGKKFSVDVIAEVDIYKYVPWDLPDKSILRTGDLEWDLTDKGIPQDSYVLCRLFKKDGPGPRNGAQYGKPFNEENWNDDDEEVDCSDSDPLVALPAPFPVLPSAHDSSIATDSQLHVSGCIVSSPLSCLSGAVPSHPSVSNVQAPPLCMMHPSDSSAQAISDDDTQVPVGDDILLMSDCFPADNTPALNENNKIEKVSNPVEENDAEGAPHLDINDIFKDLGDIDNFAGLGETGSDEFTGNQMLPLDDMPHYPDFLELHDLDSPILWQTEHYENRCPHDQGPSDQRKMDGKKD 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01561 321 PANTHER PLANT NAC DOMAIN PROTEIN 1 64 - -
Bva05g01561 321 ProSiteProfiles NAC domain profile. 6 181 IPR003441 GO:0003677|GO:0006355
Bva05g01561 321 SUPERFAMILY NAC domain 4 64 IPR036093 GO:0003677|GO:0006355
Bva05g01561 321 Gene3D NAC domain 15 69 IPR036093 GO:0003677|GO:0006355
Bva05g01561 321 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 64 - -
Bva05g01561 321 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 70 172 - -
Bva05g01561 321 MobiDBLite consensus disorder prediction 89 110 - -
Bva05g01561 321 MobiDBLite consensus disorder prediction 300 321 - -
Bva05g01561 321 Pfam No apical meristem (NAM) protein 8 58 IPR003441 GO:0003677|GO:0006355
Bva05g01561 321 PANTHER PLANT NAC DOMAIN PROTEIN 70 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01561 Bva-Chr5 12824471 12827759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01561 1 64 NAC Transcription Factor Family AT5G64060 81.250 2.58e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva05g01561 NAM 4.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01561 - - adu:107470479 179.874