Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01556 ATGCCCGCTTGGTGGGGAAGAAAATCCAGCAAGAACAAGGAGCAGCAGCAGGAGCAGGAACCAAATGGCGGCGCTCAAtctaatttcatcaaatcCCCGATTAGAAATGGTAAAACAAGTacgagaaaaggaaaggacaaACCCAAGAGCTTCGATGGGGTCTCCGGCATGATCCACTCTCGGAACTCCCCGAGGACCAGTAAGGATTTTACCTCTGTTGTTGGCTCTTCCTCGGGTTTTTCTTATTGTGATTCCGATGGCGCCGATAAGAAAGGGCTCCCCTTACCTCGACCATCCGTCTCACCAACCCATAGCTTTGGGAACGATCAAGCTCTTGCCTTGGGATGTGCCTCCATCTCTGGTTCAAGCATCAGCTCTTCTGGCTCTTACGATGATCATCCAATCTCTCAATTTAATACCgccagAGGACCAGGTGACATAAAGTTCAACACGAGGTCAAAAAGCCCAGGTCCTGGATCTAGAGGGCCCACCAGTCCTACATCACCTCTTCATCCCAGATTGCATGCTCTGAGTATTGACTCTCCTACAGGCAAGCAAGATGATGAAAGGAGTCAATGTCATCCATTGCCTCTTCCACCAGGTTCTCCAACCAGTCCATCTGCTCTTTGCAACAGCCGAGCAACTAGAGTTCCAGAAAACACTTCCTGTAATCTGTCCAAGtggaagaaaggaaagcttcTAGGTCGGGGAACCTTTGGGCATGTTTACCTGGGATTTAACAgtGAAAGTGGACAAATGTGTGCAATTAAAGAAGTCAAGGTTGTCTCTGACGATCAAACATCAAAAGAGTGCCTCAAGCAACTTAACCAGGAGATAAATTTGCTTAATCAGCTTTCACATCAAAACATTGTTCGATACTATGGAAGTGAACTGGGAGAAGAGACACTTTCAGTTTATTTGGAATATGTCTCAGGTGGTTCTATTCACAAGTTACTTCAGGAATATGGTCCATTTAATGAGCCTGTTATTCAAAACTATACTAGGCAGATTGTCTCTGGACTTGCCTATCTACATGAAAGAAATACAGTGCACAGGGATATCAAAGGGGCCAACATACTAGTTGATCCTAATGGTGAAATCAAACTAGCAGACTTTGGAATGGCCAAACATATAAACTCTTCTACCTCTATGCTTTCCTTCAAGGGTAGTCCATACTGGATGGCACCTgagGTTGTAATGAATACAAATGGCTATAGCCTTCCAGTGGATATATGGAGCTTGGGATGTACAATTCTCGAAATGGCAGCATCAAAGCCTCCATGGAGTCAGTATGAAGGGGTGGCtgcaatatttaaaattgggAACAGCAAAGATATGCCAGAAATTCCCGAGCATCTTTCCAATGACGCGAAGAATTTCATAAAGCTATGCTTACAGAGAGATCCATCAGCTCGCCCATCAGCATCACAGTTACTAGATCATTCTTTTATCCGAGATCAATCAGCAACAAGAGCTATAAATGTCAACATAACCAGGGATGCTTTCCCCTACATGTTTGATGGAAGTCGGACACCGCCAGCAGAGGTTCATTCAAATAGAAGAAGTATAACTTCATTGGATGGAGACTATGGAATGAAGACGGGGTTTGCAACTTCACGTGCAGTAAGGAGTCCAAGAGAGAGCACAAGAATGATCACGTCCTTGCCAGTATCTCCCTGTTCAAGTCCATTGCGACAATACGGGCCAGCACACAAGAGTTGTTTCCTTTCTCCTCCTCACCCAACTTACAGTATGATGGGACAAAATACCTACACTTCGAACGACTTCTCCTCATATCCAATGAGATCCAATGCTACATTCACTCTTGATCCGTGGCATGAAACATCGCTATACAAAGCCCGTACACCTGGTGGATCCCCTAGAAGCAGGCTCATATG 1898 0.4331 MPAWWGRKSSKNKEQQQEQEPNGGAQSNFIKSPIRNGKTSTRKGKDKPKSFDGVSGMIHSRNSPRTSKDFTSVVGSSSGFSYCDSDGADKKGLPLPRPSVSPTHSFGNDQALALGCASISGSSISSSGSYDDHPISQFNTARGPGDIKFNTRSKSPGPGSRGPTSPTSPLHPRLHALSIDSPTGKQDDERSQCHPLPLPPGSPTSPSALCNSRATRVPENTSCNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVKVVSDDQTSKECLKQLNQEINLLNQLSHQNIVRYYGSELGEETLSVYLEYVSGGSIHKLLQEYGPFNEPVIQNYTRQIVSGLAYLHERNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMAASKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIKLCLQRDPSARPSASQLLDHSFIRDQSATRAINVNITRDAFPYMFDGSRTPPAEVHSNRRSITSLDGDYGMKTGFATSRAVRSPRESTRMITSLPVSPCSSPLRQYGPAHKSCFLSPPHPTYSMMGQNTYTSNDFSSYPMRSNATFTLDPWHETSLYKARTPGGSPRSRLI 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01556 632 PANTHER MAP KINASE KINASE KINASE 1 614 - -
Bva05g01556 632 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 614 - -
Bva05g01556 632 ProSitePatterns Protein kinases ATP-binding region signature. 234 257 IPR017441 GO:0005524
Bva05g01556 632 ProSiteProfiles Protein kinase domain profile. 228 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01556 632 MobiDBLite consensus disorder prediction 1 108 - -
Bva05g01556 632 SUPERFAMILY Protein kinase-like (PK-like) 225 569 IPR011009 -
Bva05g01556 632 CDD STKc_MEKK1_plant 227 484 - -
Bva05g01556 632 MobiDBLite consensus disorder prediction 56 83 - -
Bva05g01556 632 SMART serkin_6 228 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01556 632 MobiDBLite consensus disorder prediction 16 37 - -
Bva05g01556 632 Gene3D Transferase(Phosphotransferase) domain 1 225 505 - -
Bva05g01556 632 MobiDBLite consensus disorder prediction 153 167 - -
Bva05g01556 632 MobiDBLite consensus disorder prediction 123 213 - -
Bva05g01556 632 Pfam Protein kinase domain 229 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01556 Bva-Chr5 12792971 12799065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01556 1 546 MAP Kinase Kinase Kinase AT1G53570 58.824 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva05g01556 Pkinase 8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01556 K04421 - gmx:100813122 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01556 05 12792971 12799065 Bva05g01556 05 12792971 12799065 ECH